Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_43171 |
Symbol | |
ID | 7196767 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 2224778 |
End bp | 2226281 |
Gene Length | 1504 bp |
Protein Length | 448 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177473 |
Protein GI | 219111443 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.899265 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AACATTTCAT ACATGTTTGT TTCGTAAATT GTCAGACCAT ACAGTGTTTG ATACGAGCTT TCAGGGGATG CACTGGCTCC CTGCACATGG ACAAGTATGA CACTATACAA GAAAACCGTT CTGTTCTGGT GGTGTACTTT TTGCATTGGT TGGCGAGGAG CTTGGTCGTT AGCGTCACCT ATCTATCAGC TGCGAAGGCC GGGCGCTCGC CTTCCTCCGA CGCCAAAATC AAAGCTACGG CGAGATTACA GTTCATTGAA TGATTCTTTC CTTTCCGCTA ATGCAAAAAG GCGACATGGA CGTAAGAGGT ATGGCCCATT GCAAACCTTT GCTCGCAGTT TTTGGAAGGG TGTCACGTTG CCCTTCCCCG CTTTACGTCG AGTCGTGTTG ATCCCCGGTA CCCAACGCAA AAAAGGAACT CGAGGAAACA TTTCCGTGGG ATTAACACTG CGGGAAGGGT TCTTGGCCGT CACAGCCTAC CTGGCTGTTG GAGTGCTAGC ATATTCGGTG GTACTGGAAA AATGGTCGCT CGTGGATGCT ATGTACTTTA CCTGTGTGTG TTTCAGCACC GTCGGATACG GTGATTTGTG CCCCACTAAT ACGGCCTCCA AAGCCTTTAC ATGTATTTTT GGATTGGGTG GGATAGCATT CCTGGGAACC GCTGTGGCAA CGATTGGGTC TAGTCTTCTC CAGGCCGAAG TGGACGCCAT TGCCAAAGCA CGCGAAAAAA GCAAGGTGCG TCTCATGAAG GTCTTCGAAA ACATGCCCAA AAAGCTGAAC CACTTTCGAA CACAATCGCG AGAAACGCAA AAGCGTGTAC TTAAGGACGC TGGCAAAAGC AGAAAAAAAA GAAGGCGCTT CTATGAAGGG TTAATTTTTG GATCTGTCGA AGAATTAGAA GGTAGAAACA GGATGCAATC AATTCTAAAC ATGGTGATCC GAGTGGTTCC CTCTCTTTCT ATCATCTTCG GAGGAGGTGC CGCCATGAAG GTTCTGAATA AAGGTTGGTC ATGGACAGAG TCTATTTACT ATTCGTTGGT CACGGGTAAG TTTGCTCGGT CCATATCTCG CCATCTCCTT CTTCCGTATC TCACTTTCCT TGGTAGCGTC AACGATCGGA TTCGGAGACT TGTCACCACA AACCCGCCAC GCCCGAATGT TTGCTATTCT GTACATTCCC TTAGCTGTAG CAGCGGCTGG TGATTTACTT TCAGGGATTG CGTTATCGTT GGTGCAACGT CGGCAACGCG AAGTTTACGA GCAACAGTTG GAACGAGATT TGACGATTGA ACACCTGCAT CTAATGGACG CCGATGGTGA CGGAAAGATA ACACGCGAAG AGTACGTCCA ATTTATGTTG ATTGAAATGG GCCGCGTTGA TCAGAAAGAG CTAGACGAGC TGTATCATCA ATTTGAGCGA TTGGACGTCA CCCGATCCGG ATACCTTGAC AATGACGATC TTAAGCTAAT GGCGAAACTT CGTGGAGCGA AGGTAAAGGG GTAA
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Protein sequence | MTLYKKTVLF WWCTFCIGWR GAWSLASPIY QLRRPGARLP PTPKSKLRRD YSSLNDSFLS ANAKRRHGRK RYGPLQTFAR SFWKGVTLPF PALRRVVLIP GTQRKKGTRG NISVGLTLRE GFLAVTAYLA VGVLAYSVVL EKWSLVDAMY FTCVCFSTVG YGDLCPTNTA SKAFTCIFGL GGIAFLGTAV ATIGSSLLQA EVDAIAKARE KSKVRLMKVF ENMPKKLNHF RTQSRETQKR VLKDAGKSRK KRRRFYEGLI FGSVEELEGR NRMQSILNMV IRVVPSLSII FGGGAAMKVL NKGWSWTESI YYSLVTASTI GFGDLSPQTR HARMFAILYI PLAVAAAGDL LSGIALSLVQ RRQREVYEQQ LERDLTIEHL HLMDADGDGK ITREEYVQFM LIEMGRVDQK ELDELYHQFE RLDVTRSGYL DNDDLKLMAK LRGAKVKG
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