Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_42755 |
Symbol | |
ID | 7196383 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | + |
Start bp | 984423 |
End bp | 985865 |
Gene Length | 1443 bp |
Protein Length | 391 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002176703 |
Protein GI | 219109900 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.010637 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTTGAGGTCC CAACGAAAGA CAGCGAATCA CCATGTTTGC CAGATTTCTT GCCGAAGAGC ACCTGGATGA GGATCATCAC GATGAGGAAC ATCACGACGA CGATAAGCCT TGGGGCGATG TCATTCTTGC TTTCATTCCT TGTGCAACTC GTCACTCTTT CCGGTATCGT CTTGATGGCC TCGATAGGCC TTTACGGTCG TATAGGCAAA AGAGATACTC ACACGATATG GGCAATCTTG CAGACCAGGA TCCTTCCGGC TTTCGCGGCA GGAGCTTTAT TAGCGGCCGC CGTTTTCTTG ATGATTCCGG AGAGCTTGGA ATTGCTGGGT GGCGGACACG AGGACCACGA AGAAGAATCT ACTTCGGAAT TCCTCAATAG TACTGTCGAG GACGATCACA ACAGCACATC AGATGCGGAC CACTCACATT TCCGACGCTT CCTGGAAGCA GAAGGAGAAC TATCGTCGCA TGGAGCTGGG CCTACGTGGA AATTCGGTGC TTCTCTATTG GCTGGGCTTC TGATGCCTAT TTTACTCACC GCTATATTCC CAGTACCTGA TATCGAGGAT TGTGATGTAT GCGAGAAGCT TCAAGAAAAT GAAGATTCTG CGCTATCTCC TGCCGCGGCG GAGACCGTGC GAGAACAAAA CGAGGAAGCG AACAGTGATA AAGCCAATAC CGAAGACAAG ACCACAATGG ACGATGGTTG TGATGCTGGC GCGTGTGGCC ACCCTAGTCA CGTAAACAAG GCCGACGATG GAACCGACGA TTCGGAAGTA TCGGTCAACA AACTAGACAA GTCTAAATCG GCTCTGCCAC TCCAAGGGCA CGCAATCAAC TGGGGTCTTG CCAGTAGTAT TCTGCTCGGG GACGCTTTCC ACAACTTTTG TGATGGTCTC TTTATCGGCA ACGCATTTTT GCTGTGTAGC CGAGAAGTTG CGTATACAAT TGTTGCTACC ACCATTTATC ATGAATTTGC TCAGGAACTA GCAGACTTTG CACTTCTTGT TCATCATTGT GGCTTGGGTC GTGTTCGAGC TTTGTTGCTC AACTTTGTTT CGGGCCTTTC TGTTCTTATT GGTGCACTGA TTATTCTAGC GTCCGATCTA TCAGATCAAG CAACCGGTTC TATCTTGGCT ATTTCTGCAG GTGTTTACAT CTATATTGCT GCTTCTGAAT GTATTCCTCG TATTCAAGCG AAACGCAAGA CCATCAAGGA CACTCTCATC TTTGTCTTGT GCTTTGCGAC CGGTGCAGTT CCGATTGGTT TGGTTCTTCT TAACCACGGT CATTGCGAGG CTGGCCATGA TCATGAAGAA GAGGATCACT AGAAGTGACA ACTCATGGTG TCAACCATTT ATTAGTGCCT TGACTTTCTT CCCAAACTAG TGCTGTAGTT GCTCCTACGT ATTGATAAGA TGTAGAGATT CCTGCTACTT CAC
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Protein sequence | MFARFLAEEH LDEDHHDEEH HDDDKPWGDT RILPAFAAGA LLAAAVFLMI PESLELLGGG HEDHEEESTS EFLNSTVEDD HNSTSDADHS HFRRFLEAEG ELSSHGAGPT WKFGASLLAG LLMPILLTAI FPVPDIEDCD VCEKLQENED SALSPAAAET VREQNEEANS DKANTEDKTT MDDGCDAGAC GHPSHVNKAD DGTDDSEVSV NKLDKSKSAL PLQGHAINWG LASSILLGDA FHNFCDGLFI GNAFLLCSRE VAYTIVATTI YHEFAQELAD FALLVHHCGL GRVRALLLNF VSGLSVLIGA LIILASDLSD QATGSILAIS AGVYIYIAAS ECIPRIQAKR KTIKDTLIFV LCFATGAVPI GLVLLNHGHC EAGHDHEEED H
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