Gene PHATRDRAFT_42568 details

Gene Information

• Locus tag: PHATRDRAFT_42568
• ID: 7196268
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: -
• Start bp: 456223
• End bp: 458537
• Gene Length: 2315 bp
• Protein Length: 499 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002177090
• Protein GI: 219110677

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CACGAGCTTA GCATTGATTT GACAATTCAA CGCAACCCAC ACGGACAACA TTGATCAGCA 
TTTGGACCCA TTTTGGAACG ATTGGCACAT CCAGATATTC ATTGGCGCTT GGCGCGGTGA 
CACGAGATTT GATACCTACC TCATACTGTA AGCGCTCAGG CGATTGAAGG CGACAATTGA 
TTTCCCGAAA GCAACCATTG CTGACTTGTC AAACGCGACG CCGCGAGAGT GAACCCAGGA 
CGATTCGCTC TTCGGAACCT TTTTGCTGTT TTGTGTTCAC TCCACAGTCG TTTCCCTATC 
ATTAGTATTG ACTTTCTATT CGCGCGAACA AGTATATAAC CTTCTGGTGT CTTCTCGTGC 
TTATCGCTGT TGCTTACTGC TAGTTTGGTG TCTCCCATCA TCCTACGCAA AACGTCCGAT 
CGAGCCCATC CTACCCAAAC TATGATGCCA GGAACGCAGA ATGTTCCCAA CGTCCCCTGT 
GAAGTCGGAA AGACCGATCC ATGCGAGATG ATTTCGAGTA GAGTCGACGC CAGCAACGGA 
GTCTTCCCCA CCAATCCACT AAGCGAAGAG TCGGAAGAGT CTCTCAGAAT CGACGGCAAT 
TCCACGCTGG GAGAACCAAT GCCACCGAGC AACGCGGACT CCAACGTTGA GGATGATGAC 
GACCTAGAAT ACGATTCTGA TCACGGGCTG ACTACCGGAA ACTCAATCCT AAAGTGGGAA 
GAAAACTTCC ATAAGCTTGC AGCCTTTAAG GAGAAGCATG GACATTGTTT AGTGCCGAAT 
CGATACCCCG AGGATCCGCA ACTTGGAAGT TGGGGTGCGT CAAGAAGTGT TCGTGAGGAT 
ATGCCTCTGC TTACTGTCCA ATCAAAAGAT CTCACACGTG TGTACCTGCT ATGGGCATAC 
TTCTTCTCCT GCTTGACTCA GTGTCGACCC AACGGAGGCA GTATAAGATT ATGAGGAGCA 
GTAACACAGA CTCGACCGCA ATGACGGAAG AACGGGCCAA ACGCCTGGAA GGAATTGACT 
TTCAATGGTC GACCAAAGAT CCGAGGCACG TACCGTGGGA TGCACGCTAC GAGGAGCTCG 
TTGCATTTGT GGTGAGTGCC CCTTCGTCTC GAAAGCCCGT AAATGCCGAC TATTGATGAC 
GCTCACAACT CTCGTTTCCT GGTTGGTATT CGTACGAGCA GAAAAAGTAC GGGCATTCGC 
AAGTGCCAAT CGGGTGGGAA AAGAACATAA AATTGTCAAA TTGGGTATCC ACTCAGGTAT 
GTTTCAACCC TCATGCGTAA AAGGACCACT CGGCCTTGAA CTGGAAAGCC TCGTCCCTGA 
CCGAATCCTT TGCTCTTTCA CCCTGGCACT TTGTAGAGGC AAGAATACAA ACTTTTGAAA 
AAGGGGCGCT CTTCCCGTCT AACCGACAAT CGTATCGACC AGTTGAACAA AGTCAGTTTT 
GTCTGGGAAG CGCAGCGTGG TGGGCCGCGA AGGAAGCGAA AAGCTTCTGT GTCCGTTCCA 
GAAAAGCCCA ATCCAGTGGC GGGAGTCGGT CCTGTTTCGA ATTTCGCTGC CACTAGAGGG 
GGACTGGCAC AGGCACCAAT GGGGAATGGT GGAAGTCTCG CGAACATGAT GGTAAACAGC 
CAGCGCGTAG CTTTCGCGCA GCCGGGGTTC AATAATTCTA ATCCTGTTGA TCTAGCAGCC 
TGGTCAATGG CACAAATGGT GGGATTACAA AGGTTAACCG AGATCCAGAA CGCCATGTTC 
AATCCCTGGC AAGCATTGGC GTTCGGTGGG TTTCAATTCA ACCAACGGCA GCTAAATGCT 
GCCATGTCCC CTGCAAACAC GACCAGAGGT TTGGCTTCTA TGTTTCCAAT CGCGTCGCCG 
ATGCCCTCGG CTAGTGGAGG TGGTGGAAGT GGCGGCGCCA CACAATTCTC CGCTTTTCCA 
ATGAGTAGTA CGGTGTCTGC TTGGCCATTG CAGGCTTCCG TAATTTCTCC TGCTGTCCCG 
CCGCCGTCGG CTACGACGAC GCTACCCATC AACCCATCGC CAGCCGATCA GCAGCAACAA 
ACCGATTTTG TGATGGAAAA AGGAACGGCG TTGAGTGCCA GGACCGCTGT CGCTGCTCCT 
ACAAACCATC CGCCTTCGTC TGCGACAACG CTTCTCAGTG ATCCATCGGC GGCCGAATTG 
CGTCGACAAG TTGATATTTT GTTGGCCCAA GGAGGGGTGT TGAACGACAG AACTACTACG 
CTTGCAGAAC AACAATAAAT AGAGCACAGA CCCATCTACG GCTTTAGTAA TGTCGTTGTT 
TGAAGTGCAG GTATTATAGA GTTGTTCTTA CTTCC 

 

Protein sequence

MMPGTQNVPN VPCEVGKTDP CEMISSRVDA SNGVFPTNPL SEESEESLRI DGNSTLGEPM 
PPSNADSNVE DDDDLEYDSD HGLTTGNSIL KWEENFHKLA AFKEKHGHCL VPNRYPEDPQ 
LGSWVSTQRR QYKIMRSSNT DSTAMTEERA KRLEGIDFQW STKDPRHVPW DARYEELVAF 
VKKYGHSQVP IGWEKNIKLS NWVSTQRQEY KLLKKGRSSR LTDNRIDQLN KVSFVWEAQR 
GGPRRKRKAS VSVPEKPNPV AGVGPVSNFA ATRGGLAQAP MGNGGSLANM MVNSQRVAFA 
QPGFNNSNPV DLAAWSMAQM VGLQRLTEIQ NAMFNPWQAL AFGGFQFNQR QLNAAMSPAN 
TTRGLASMFP IASPMPSASG GGGSGGATQF SAFPMSSTVS AWPLQASVIS PAVPPPSATT 
TLPINPSPAD QQQQTDFVME KGTALSARTA VAAPTNHPPS SATTLLSDPS AAELRRQVDI 
LLAQGGVLND RTTTLAEQQ