| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42527 |
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| Symbol | |
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| ID | 7196077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | + |
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| Start bp | 308705 |
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| End bp | 310421 |
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| Gene Length | 1717 bp |
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| Protein Length | 522 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002176562 |
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| Protein GI | 219109615 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000294856 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TGCTCATGTA CCAAAGCAAA TCAGCACCGT AAACATAGGG CGAGACCTTC GAAAACCTGC
GTTATTAAAA CTGTGTGTGA TAGGTTGTTT GGTCCCCACC CACTCTTGTC TCCCGCAATA
ATGGCAGAGA TGTCGGATGC CCCGGGCGAC TGCTACTTGG GTATTGACAA TGGCACCCAA
GGTTTATCGG TGGTGTTGAC GGATGCCAAC CTCAAGCGTT TGGTTACCGG AGAAAGCAGC
TATGAGTTTG TCCCAGATAC TGACGCGGGA TGCTACGAAC AACTCACGGA TGATTGGGAT
CTAGCCCTGA CCGACGCTAT GAAATCCGTC CATTGCTATT TGTCAGAACA CAAGTCCTTA
CAAATAAAAG CTATAGGTAT CTCGGGGCAA ATGCACGGCG AAGTCTTGGT GAATCATGAA
GGCCAACCTT TGTCGTCGGT CCGTCTCTGG TGTGACGGTC GCAACGAGGA CGAAGGCGAG
GAACTCACAC TCGCGTTTCA ATTCAAGGTT CCCAAACGAG CAACCTGTGC AAGATTTCTT
TGGACAGCTC GCAATCGACC CGAATTGGCC AGTCGCGTTG CGCACATAAC GACACCGGCA
GGCTGGATGG CTTACCGACT GACCGGAGAT GTTGTACTCG GAATCGGTGA TGCAAGTGGC
ATTTTTCCTA TTGACGCGGA TACTCTTGTT TACGACGAAA ACATGCTGCA AACGTTTGAT
AATTTGGTCG GAAATGCTGA TATCCCATCT ATGCGAGACA TTCTCCCGAC AGTACGACGA
GCTGGTCAAG ATTCAGGAGT GCTGACGCAA CAAGGCGCCG CTTTGTTGGG CTTCCAATTG
CCGCCAGACT ATCCAATCGC AATAGCTGCG GCCGAAGGCG ACCAAGTGGC CGCTCTGGCA
GGTAGTCTTA TTGGCCGGGA TGGTATCGTC TCATGCTCGT TCGGAACCTC GGTTTGCGCG
AATGTAGTTA GCAAACACGG CGCAGTAGAA TTGCCTGTGG AGCCTTCCGT TGATCACTTT
TGCGGAGCCG ACGGCAAAAA CATACACATG GTTTGGCTGC GCAACGGTAC AACGTTTTTC
AATACAATGG TGGCTTCGTA TGGAATCCTG TCGGACAAAA ACGATGCATT TTCTGCTGTC
ATGCCCCAAA TGCTCAACGC CGCCCCTGAT TGCGGCGGAC TGCTTGCGCT GCCTTTTATG
GATGATGAGC CGGGCTTGCA AGTTTCTAGG GGTGGTACGG CTCTACTCCT TGGTCTCAAT
GGGAACAACG CAACACCAGG AAATATTGCC AAGGCGGCCC TGCTTTCCAC CATGTTCAAT
TTGAAACTGG GTTGTAAAAT TCTACAAGAG AATGGTGTTG TTATGAAAGA ATTGGTTTTG
ACCGGTGGTC TGTCAAAGTC CCCCGCCTGC GGACAAATTT TGGCCAATGT TTTTGGCTTG
CCAACCCAAC TGCTGGAGGC GGCAGATGAG GGAAGCTGCT GGGGTGCTGC TGTGCTGGCG
AAGTACCGTC ATTTGAGCAT TGGAGACAAT GGAAACGACT GGACACTTTT TTTGGAGTCA
ATCATGAAAG AAAAACGTAT TGAACAAACC AGGTTTGAAC CCGATTTCAA TGCTGTGCAC
GAATATTCCA AGGTGTTCGA CCGCTACCAG ATCCTTGTAA AATTGCAAAC ACAACTAGCC
AATGTTTAAA TTATAGATTA CACCCGTCTG TTTCCGG
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| Protein sequence | MAEMSDAPGD CYLGIDNGTQ GLSVVLTDAN LKRLVTGESS YEFVPDTDAG CYEQLTDDWD
LALTDAMKSV HCYLSEHKSL QIKAIGISGQ MHGEVLVNHE GQPLSSVRLW CDGRNEDEGE
ELTLAFQFKV PKRATCARFL WTARNRPELA SRVAHITTPA GWMAYRLTGD VVLGIGDASG
IFPIDADTLV YDENMLQTFD NLVGNADIPS MRDILPTVRR AGQDSGVLTQ QGAALLGFQL
PPDYPIAIAA AEGDQVAALA GSLIGRDGIV SCSFGTSVCA NVVSKHGAVE LPVEPSVDHF
CGADGKNIHM VWLRNGTTFF NTMVASYGIL SDKNDAFSAV MPQMLNAAPD CGGLLALPFM
DDEPGLQVSR GGTALLLGLN GNNATPGNIA KAALLSTMFN LKLGCKILQE NGVVMKELVL
TGGLSKSPAC GQILANVFGL PTQLLEAADE GSCWGAAVLA KYRHLSIGDN GNDWTLFLES
IMKEKRIEQT RFEPDFNAVH EYSKVFDRYQ ILVKLQTQLA NV
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