| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_40135 |
|---|
| Symbol | |
|---|
| ID | 7195920 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011690 |
|---|
| Strand | - |
|---|
| Start bp | 237208 |
|---|
| End bp | 238593 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002184209 |
|---|
| Protein GI | 219127994 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGCGG CTAGTCACTA CCGACGCACC AACTCTGATG CGAAGGTGAG ACTCGTCATA
CTCTACCTCT TGATATGTCG GGTGGCTAGC TTTTCTGTCA AGAATACGGA GCAATCGTCG
AGTTGCATTT CGCTGGATAA TCTTCAAAAT AAACGAGTGT TGGTAGTGGG TGGATCAGGC
CGAGTCGGGG GCAGTTGTGT CACTCAACTA GTGCTCCGAG GCTCGCAAGT GACGGTCGGG
GGGACCAACG CGGAGCGCTT CCTAAGCTCG CGAAAACGAT GGCAAAGTCT CTTTCCCGAC
ATATGCGAGG ACCTGGAAGA AGTGGATTTT GTTGCTCTCA ATCGAGAGCG ATCAGAATCG
GTCCAAGCAG TCCTGAGCGG ATATGATCTT GTCGTGCATA CAGCAGGACC TTTTCAGGGA
AAAGTTAATA CGCCGAACGG AGTCATTGAA GCTTGCGTAG AGAATGGTGT GCCGTATATC
GACGTGTGTG ACGACTACTG CACAGCATCG GCAATTAAAA CCAAGCTTGC GGAAAAGGCT
AAAGAAAGCA AAACTCCATG CATCATTTCT ACTGGATGTT GGCCGGGAGT ATCCAGCCTC
ATGGCAAAAC AACTTCTGCA AAAATCTATG CAAGCCTATC CTGATGTAGA CCAGAGAGAT
ATATCGGTCA AGTTTTCCTT TTTCACCGCG GGATCTGGCG GGGCAGGTGT CACGTTATTG
GTTGCTACCT TTCTAATTCT CGCTGAAAAA GCTTTGACGG TCGTCAATGG CCGTCGAAAA
GTCGTAACTC CCATGGAAAC ATATTCAACC GTGCATTTTG GGCCTGTTGT TGGTGATAAA
GAAGTGGCGC ACCTTAATTT GCTTGAAACA GCGTCGGTGG CCGATGTCTT GCGCATTGGC
AACGTTCAGG CTCTCTTTGG TACCGCACCT AACTTTTGGA ATGGTCTACT TGGCCTGATG
GCGAAACTAC CAACACAGCT ACTCGAAAAC GAGGACCTTA TGCGCAAGCT CTCCATGTTT
TCTCTGCCTA TCGTGCGATT GGTGGATGCA TTTGCGGGTG CTACCAATGC TATGCGCTGC
GATATCTCCA ACACAAAAAA TCCTGATTTG TTTCGATGCT CGGCAATTTA TGCCCATAAA
AATCTGGAAC CTTGTGTTGG CGAATGCGTC ACAGCCTTCG CAGCTGCAGT TCTTTCTGGT
GCTGTCCGGG ACGGGATCTG GTTTCCGGAA GAAGCAATTC AGGGTGGCGT CGATGCGGCT
GCCGTCTTGG CGGCGGCATC TGTCGGTGCG CATACCGTTC TAGTCAGTTC CGAAGGAATG
GAATTGAGTC TAGAACAAGT GTGGGGCACC AGAAGAAAAG AAACTATAAC AATGACGAGC
ACGTAG
|
|---|
| Protein sequence | MIAASHYRRT NSDAKVRLVI LYLLICRVAS FSVKNTEQSS SCISLDNLQN KRVLVVGGSG
RVGGSCVTQL VLRGSQVTVG GTNAERFLSS RKRWQSLFPD ICEDLEEVDF VALNRERSES
VQAVLSGYDL VVHTAGPFQG KVNTPNGVIE ACVENGVPYI DVCDDYCTAS AIKTKLAEKA
KESKTPCIIS TGCWPGVSSL MAKQLLQKSM QAYPDVDQRD ISVKFSFFTA GSGGAGVTLL
VATFLILAEK ALTVVNGRRK VVTPMETYST VHFGPVVGDK EVAHLNLLET ASVADVLRIG
NVQALFGTAP NFWNGLLGLM AKLPTQLLEN EDLMRKLSMF SLPIVRLVDA FAGATNAMRC
DISNTKNPDL FRCSAIYAHK NLEPCVGECV TAFAAAVLSG AVRDGIWFPE EAIQGGVDAA
AVLAAASVGA HTVLVSSEGM ELSLEQVWGT RRKETITMTS T
|
|---|
| |