Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_39526 |
Symbol | |
ID | 7195217 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011688 |
Strand | - |
Start bp | 52553 |
End bp | 53919 |
Gene Length | 1367 bp |
Protein Length | 337 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183663 |
Protein GI | 219126854 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTACGTG CTAACGATGT GTTTTGTGAA TAAGAGGCTA GGGAATGCTC ATGCATTAGG AGTCGACGGA TGTAGGCAGA GAATATTACA ACTTAAGTGG AGGAAATCTC GATGGAACCC GACCCATTTC CAAGTGGGCA CTTCGGGCGT AGACAAACCG TGGCAATGGT CTTTAGGCAG AACCGTTTGG GCTTGCAGTG TACTTTGTTG CTGGTTTTCT CACATATGTC TTCGACTTTC TTAGAGGCCT TACCTTTTGC AAGGACACGA ACGTCCGATT ACGACGATCA AATTCAACTA CGACGGCGAC TTGTTGTTTT CGGCTTCGAA GGATCTGGTG CCATCGGTTT GGCGTGCCGA CAACGGCGAA CGCTTGGGTA CCTTCAACGG ACACAAGGGT ACCGTCTGGG ACTTGGACTG CGATCGCTTC ACCACGCGAT TGTTGACGGC GTCCGCCGAT GCCACTTGCC GCTTGTGGAA GTGCGAAACG GGTGAATGTT TGTTCGTGTT CAATCACAGG GGTCCCGTTC GCGGAGTAGC GTGGGCGGAA GGCTCTCGGA AATTTGCTAC AATCTCGGAT CCCTTCGTTG AGCACAATTC GAAAATTCGA GTGTTTGACT GTCCAGAAAA CGGTGACCTT ACCGACGACG ATGTTATGGA AATCGACCTA CCCAAGATAG GAGGCAAGCG TGTCAATCCT ACCAACATCC AGTGGACGGG CAACAATGAA GATCTGCTGG TAGCATTCGA CAATGGTGAG ATCCGTCTGT ACGACCCAGA AACAGGTGAC TTGAAAGAAG AAATTCAGGC GCACGATAAA AAAATCAATC GGCTACGATT CAACAGGGAC AAAACCCTTT TCATCACGAG TTCCGCTGAT TTCACTTCCA AATTATTCGA CCCTGTCGAT CTCAAGCACT TGAAAACTTA TAGGACGGAT AGGCCCGTCA ATGACGCAGT TATTTCTAAT AAAAAAGACC ACATTCTTGT GGGAGGAGGG CAGGACGCCA TGAGTGTAAC AACAACTTCC GGTAAGGTCG GGAAGTTTGA GACACGATTC TTCAACATGG TGTATGAGGA TGAATTTGGA AGCGTCAAGG GGCATTTTGG TCCGATCAAT GCGTGTAAGT GGTTCTTATG ACAGTCAACA ATATAGTTTC CGATTGCTGA TTTTCATGGA TTTTCTCACC GTGTTGCTTT TGTTTTTTCG TTGCGCAGTG GATATAAACC CGACAGGCCG CAGTTATGCT AGCGGTGCTG AGGACGGATA TGTTCGTCTT CATCTGTTCG ATAAGGACTA TCTAGATATG AAAGACCCCG TACCGGAAGA GGATGAAGCA GAGGAAGTAC CGCCCACTAG TCAGTAA
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Protein sequence | MRPYLLQGHE RPITTIKFNY DGDLLFSASK DLVPSVWRAD NGERLGTFNG HKGTVWDLDC DRFTTRLLTA SADATCRLWK CETGECLFVF NHRGPVRGVA WAEGSRKFAT ISDPFVEHNS KIRVFDCPEN GDLTDDDVME IDLPKIGGKR VNPTNIQWTG NNEDLLVAFD NGEIRLYDPE TGDLKEEIQA HDKKINRLRF NRDKTLFITS SADFTSKLFD PVDLKHLKTY RTDRPVNDAV ISNKKDHILV GGGQDAMSVT TTSGKVGKFE TRFFNMVYED EFGSVKGHFG PINACRSYAS GAEDGYVRLH LFDKDYLDMK DPVPEEDEAE EVPPTSQ
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