Gene PHATRDRAFT_38840 details

Gene Information

• Locus tag: PHATRDRAFT_38840
• Symbol: TOP6B
• ID: 7203590
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011685
• Strand: -
• Start bp: 323515
• End bp: 325563
• Gene Length: 2049 bp
• Protein Length: 682 aa
• GC content: 49%
• Product: type II DNA topoisomerase 6 subunit
• Protein accession: XP_002182945
• Protein GI: 219125348

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.833809
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAAAA CCAACGGCGT GGCCTCCAAG GCTTCGGCCG GCGAAGTTCA GGTACAGAAA 
AGCCCGGCCG AGTTTTTTGC CGAGAATCAG GCCATTGCTG GCTTTGACAA TTTGGGAAAA 
TCTTTGTACA CGAGCTTACG CGAGCTCGTC GAGAACAGTC TGGATGCGTG TGAAAGCATC 
CATGAATTAC CCGAGATCTC GATAGAAATC AAAGAATACA CGCAGGAAGA GTTTAACGCA 
CTAGATGTTA TGAAGACCAG TCCACGCAAA AAACGAGATA TGCAGCTCTT TGAAACGAAG 
AAAAAGGATA AGAAACCTCC GAAAGAGGCA ACCGATGTCG ACGAAATCAC CACCGTCGAA 
AATTCAGGGA AAAAACGTAA GAAAGCGCCA CAAGACGCCT ATTTCAAGCT CACCGTCAAA 
GACAATGGTT GCGGTATGTC CCACTCGGCT ATTCCAAACC TATTGGGTCG AGTCCTCAGT 
GGAAGCAAAT ACGGTGTGCG GCAGACTCGG GGAAAGTTTG GGCTAGGGGC AAAAATGGCC 
TTGATCTGGG CCAAAAAGAG TACGGGACAA CCTATTCGGA TCATGACGTC GCATCGGCCA 
GATGGGGGCG TCGCACCAGA ACGAGCGTCC GCATGTGTGC TCGATATCGA CATATATAAG 
AACGCTCCCC GAATTTTAGA ACACACAACT CGCAAAAATA CGGACGGCTG GATGGGTACT 
GAAATGTCCG TGCTGATTGC GGGAAATTGG ACAACCTACA AGTCTCGAAT TGTCCAATAT 
CTGCAGCAGC TTGCTATCAT AACTCCCTAC GCCGTGTTGG AGCTTGCCTA CATCAATATC 
TCTGATTCAA AACGCAATCT ACATGTGCGG TACGACCGCC GTTCAGACCA AATGCCACCA 
CCGGCAAAAA CTATCAAACA TCATCCCGCA TCGGTCAACA ATCTAGTCAT TCAACAACTC 
ATACAATTCA CCAAAACAAG AACCCTTTTT AAATTTCTGT CCACCGAACT GTCGACCGTC 
AGTCCACCGT TGGCCCGTCG ACTAGTTACC GAGCTCGGCT TTGACGAAAG CATGCCTCCT 
TCGTCGCTTG AAGACAAAGA AATTACTCGG CTTGTTCAGC TACTTCGCCA AGTCCAGCTC 
TTCAAAGCTC CTGATGGGTC CTGTCTAAGT CCACTTGGTG AATATAATCT GAATCTCGGC 
ATTCGCAAGG TTCTGGAACC TGATCTGATT GCCACTTCCC GTGATAAGCC AGGGGCCTAC 
GAAGGCCACC CTTTTCTGGT AGAAGCAGCA GTTTCCTTAG GTGGAAAAGA GGTCAAGGAA 
GGGATTACGG TGATTCGATT CGCGAACAGG ATACCGTTGC TCTTTGAAGG AGGAGCCGAT 
GTTGCAACTA GGGTTGCGAA TACCAAAATC CGATGGTCCA ACTACAAGAT GGATTACAAA 
CGCGATCGGA TTGGCGTTTT TGTGTCCATT GTATCAACCA AAGTTCCCTT CAAGGGAACT 
TCAAAGGAAT ACATCGGTGA TGACGCGACG GAAATTCAAC AATCAGTGAA GCGCGCGTTA 
CAATCCTGTT GTCAACAATT ACGAGGTTAC TTGGCAAAGC GATCCGCGTT GAAAGATGCA 
CAGACACGGA AATCTCGAAT GGCTAAATAC GTTCCTGATG TGGGACGATC CTTGTTCGGT 
ATCCTAGATA GCATGCGAGC GCGCCAGGCG GAACTTTCGC TGCCAGAAGC ACCGCCTAGC 
CAATCCCCAA CTAAGCGCTT GCGCTTGGAT CGGAGCGCGG CTCAGCTAAT GATCGAAAGG 
CTGAATAGAG GGGAGGTGAC GGAGCAATCA CTGGCAGCAA AACTGACGGA AAGCATTGAT 
GATCAACTAA ATGTTCAAGA GGAAGGAACT GACGATAAAG GAAGCGCGCC AACACAGGAA 
GCTCAACCCC TCTACTTGGT GCCGTTGTAC AATCTCGACG ATGATTCCAA CGACATTTCA 
CATCCCCTGT TTACATTCCG GCCCATAATG CCGATTCTGC GAATGCCTGC AATGCAAGTT 
CAAGAATAA 

 

Protein sequence

MAKTNGVASK ASAGEVQVQK SPAEFFAENQ AIAGFDNLGK SLYTSLRELV ENSLDACESI 
HELPEISIEI KEYTQEEFNA LDVMKTSPRK KRDMQLFETK KKDKKPPKEA TDVDEITTVE 
NSGKKRKKAP QDAYFKLTVK DNGCGMSHSA IPNLLGRVLS GSKYGVRQTR GKFGLGAKMA 
LIWAKKSTGQ PIRIMTSHRP DGGVAPERAS ACVLDIDIYK NAPRILEHTT RKNTDGWMGT 
EMSVLIAGNW TTYKSRIVQY LQQLAIITPY AVLELAYINI SDSKRNLHVR YDRRSDQMPP 
PAKTIKHHPA SVNNLVIQQL IQFTKTRTLF KFLSTELSTV SPPLARRLVT ELGFDESMPP 
SSLEDKEITR LVQLLRQVQL FKAPDGSCLS PLGEYNLNLG IRKVLEPDLI ATSRDKPGAY 
EGHPFLVEAA VSLGGKEVKE GITVIRFANR IPLLFEGGAD VATRVANTKI RWSNYKMDYK 
RDRIGVFVSI VSTKVPFKGT SKEYIGDDAT EIQQSVKRAL QSCCQQLRGY LAKRSALKDA 
QTRKSRMAKY VPDVGRSLFG ILDSMRARQA ELSLPEAPPS QSPTKRLRLD RSAAQLMIER 
LNRGEVTEQS LAAKLTESID DQLNVQEEGT DDKGSAPTQE AQPLYLVPLY NLDDDSNDIS 
HPLFTFRPIM PILRMPAMQV QE