| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_38067 |
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| Symbol | |
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| ID | 7202749 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011682 |
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| Strand | - |
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| Start bp | 796853 |
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| End bp | 799295 |
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| Gene Length | 2443 bp |
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| Protein Length | 698 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002182137 |
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| Protein GI | 219123654 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00714206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCCTA ATGCTAAGAC AGAAGAAATA CGGCAGCATG GAGTCAAAGG CGTATACTAT
GCTGGAAACT GGTTAGATAT TGAAGACTGC GATGGTGTCT TTCAAAATGT GGAGAAATCC
TGCTCCGGAT GCGACTTTCA GGACGCTTGT CCACGCTCTC GATCGCGTAA AGTTGCCGCA
AAAGATGATG ATACGTATGA TGTCGTAATT ATCGGTGCAG GCTGCATCGG GGCAGCGATT
GCGAGAGAGT TGTCACGTTA CAAAATTAGT GTGCTTTGGG TCGAAGCCGG CGACGATGTC
TCGCAAGGAG CGACAAAAGG TGAGTGTGTG CTTTCTACGA GTCGCTGGAT CATGCTTCGC
TCTCACATGA CAAACGCGCA TGCTATTGCG TAACTTATTT GCAGGAAACT CGGGAATTGT
TCACGCCGGA TATGACGACA AACCTGGTAG TAATCGGGCC AAGTACTGTT GGAAGGGAAA
CCAGATGTTT GCTGCGTTGG ACAAAGAGCT ACGATTTGGC TATCAAACTA ACGGATCACT
TGTTTTGGCT TTTAAGGAAG CCGACAAGAA GGTGCTGAAT AATCTTCTCA AGCGTGGAAA
GACCAACGGC GTCCAAAACT TGAGGATCGT CGAACGGGCC GAGCTACTTC GGATGGAGCC
ACACGTGCAT CCAGACGCCA TTGCGGCCTT GTATTCACCC GATGCAGGAA ATGTTATTCC
GTATGAGGTA CTTAGCAGAT TCCAGTTTTA TGCTTGTGAG TCGCTCTGTT CTTTGAGGTC
ACCTGACTTT CTTCTCCTTG TCGCACATTT CAGTACGCCG TGGCTTTAGC TGAAAACGCA
GTCGACAACG GCGTTGAGCT TCGTATTCGT CGGCAAGTAA TGGACATTCA AAATAAAGAT
AAAGGTCATA TGATGGTGAC TTTGAAATAC TGGGAACCAG AAGACTACGT CAGAGCCATC
GCACAAGCTG GTAAAGCTAC AGTCTTCAAC TTTGCCATGT ATGCCGTAGG TGCTACCACT
GTGGCTCATT TTTTTGTCAC CAAAGGCAGT GCACACAAGC AAAATGAAAA GTATCATTTA
GCGGTTCTGT GCTTCTTGTG GATTCTAAGC AAGCTGGTGC CTTTCATCTT TCCCAACGCT
GCAACATCCA AGGTTGATCG CAGTATTCCC CTGTGTCATT TAGTGGACCA GGCTAGTCCT
CCTGTTGGTA CAGGAGGCGG CCATCCTGTT TCAGTGCCGG ACATGCTGGT GGGAGGATCT
GGAGGTCCTC GTCCTATGCA AGGCAAGATT GTATCGACGG AAAAAATTAA AACAAAGTTT
GTCGTCAACT GTGCAGGCGG CGCCGCCGAC GAGATTGCTC GCTTGGTGGG TGACGATTCA
TTCAATATCA AGCCTCGTCT TGGAGACTAT ATTTTACTCA ATCGGAATCA GGTAAGCATA
CTCAAGTATC ACGGGTTCTA GTACGCAACT ATATCGGCGG GACGTGCGCG AGACTCAACC
AACGTTTTTC TCGCTTTTCA AATTCAATGT TCCAGGGCTA CCTGGCTAAG CATACTCTGT
TTCCGTGCCC AGATCCTAAG CTTGGAAAAG GTGTCTTAGT CCAGACAACG CTATGGGGAA
ACTTGATTCT TGGTCCGACG GCTCGTGATG TAGGCAACGA GGAAGCTAGG AAGATGTCTT
CAGCGGCAGT GCAGGAGTAC ATCCTTGCTA AATGCAAACA GCTCGTTCCT GGTTTTGACC
CTCGCGAAAC ATTTCATGCG TTTTGCGGAG CACGTGCGAA ATCGGATCGT GGCGACTGGA
TAATTGAGCA TTCCAAGAAC GATGCCCGCA TGATTCACGT TGCTGGAATC GATTCGCCTG
GATTGGCTGG CTCTCCAGCA AGTACGTGTA ATTGCTGCAA CTCCAAAATG CTTGGCATTG
CAGCTTGAAG CTGACACAAA ATATACTCAT TTTTACTATT TTAGTTGCTC TCGACGTGAT
TGAAATGCTG CGTAAGGCGG GCCTCACGAC AGAAACAAAT CAGAGCTTCA ATCCTAATAG
AGCGCCGATC GTCATCCCCA AAGTTGGGAT GAAAGGGCTG AAAATGGGAC CCGTCGGCAA
GTTCGACAGC GATGGTAGCA ATATGGAGCA AATGGCTGCG AATGTAGTTT GCAAGTGCGA
AAAGGTTACA GAGCTAGAAA TCGTTCGAGC GATTCGTCGT TCCCTGCCAA TTGATTCGTC
GCAAGGAATT AGGAAGAGGA CTCGGGCTGG TATGGGTCAT TGTCAGGGCG ACCCTGAAAA
CTACAACTGC GAAGCTCGTG TACGAGCTAT CATCGCGCGA GAAAACGGTG TGCCCATTGA
ACATGTGGGA GGCCGTCCAT GGCCCGCCAC GTCAACGCTC TCCCAACGCT GGATCAATGA
AAAGGAAAAA CAACATCTCG TGGACTGCAT GAATGTAGAG TAA
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| Protein sequence | MTPNAKTEEI RQHGVKGVYY AGNWLDIEDC DGVFQNVEKS CSGCDFQDAC PRSRSRKVAA
KDDDTYDVVI IGAGCIGAAI ARELSRYKIS VLWVEAGDDV SQGATKGNSG IVHAGYDDKP
GSNRAKYCWK GNQMFAALDK ELRFGYQTNG SLVLAFKEAD KKVLNNLLKR GKTNGVQNLR
IVERAELLRM EPHVHPDAIA ALYSPDAGNV IPYEVLSRFQ FYASENAVDN GVELRIRRQV
MDIQNKDKGH MMVTLKYWEP EDYVRAIAQA GKATVFNFAM YAVGATTVAH FFVTKGSAHK
QNEKYHLAVL CFLWILSKLV PFIFPNAATS KVDRSIPLCH LVDQASPPVG TGGGHPVSVP
DMLVGGSGGP RPMQGKIVST EKIKTKFVVN CAGGAADEIA RLVGDDSFNI KPRLGDYILL
NRNQGYLAKH TLFPCPDPKL GKGVLVQTTL WGNLILGPTA RDVGNEEARK MSSAAVQEYI
LAKCKQLVPG FDPRETFHAF CGARAKSDRG DWIIEHSKND ARMIHVAGID SPGLAGSPAI
ALDVIEMLRK AGLTTETNQS FNPNRAPIVI PKVGMKGLKM GPVGKFDSDG SNMEQMAANV
VCKCEKVTEL EIVRAIRRSL PIDSSQGIRK RTRAGMGHCQ GDPENYNCEA RVRAIIAREN
GVPIEHVGGR PWPATSTLSQ RWINEKEKQH LVDCMNVE
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