Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_37960 |
Symbol | |
ID | 7202877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011682 |
Strand | - |
Start bp | 515437 |
End bp | 516975 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182082 |
Protein GI | 219123543 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGAAG CCTCAACTAT TCACAATCCG GATTTATTTC AAAACTTTAT GTCCACAAAA GGAACATACT ATCTTAATGG ACTCGCATCA TGCCAGGTTG GCGACCGCAT AATGCATCCC TTTGAAGCAC ATGGACACTG CAAATCGATG GTCTTCGACG GTCAAGGCTC CCTACATCTT ACATCTCATC TGATCGAAAC ACCTCTGACA CAAAAAGAAA TTCAAACAAA TCAACCCGTT GCCCGGGGCG TCATGTCGAC TCTTGCTGAT CCTACCACCC TTTGGGGTAT GCTGCAGAAT GCCTTATCCC CGACCGAGCG CGACACGGCC AATTTGGTTG CATCACTTTG GCCACCTCCG AGTGAAGCCA CCGGTATCAC CACAAATCCG CTGTTGATAA CATGTACAGA CAATGGCGAG CCCTACGTAC TGGACCCCAA AACGCTCAAA ACAAAGGGGA AACTGACAGA AGTTGTACCA AAGCTAGGAT CCATTTTGGA CGGGAAAAAG TGTTTGGCAC ACACAAGGTA CGATCCCGTT CGCAAACATT GGATCCTTTG CGTAAACGAA ATGGATATAC CTGGCGAAAA CTACATGGGC AACTCGACCA TGATATTCTA CGAGCTGGAC ATCAATTTTG ATGTTGTATC TTCTCGATCG TATACAACTC GATTCATGGT CTTTCATGAT TGGGTGATTA CCGAAAACTA CTACGTTGTG CCGCAGAATC CGGCTCGAAT TAAATGGGCA GAACTTGGCA AGTTTCTGCT GGGTGCCACG GTTGGGACAG ATATTTTCGG AATGGAAGAA GCCACCAATG GGGCATTTCT GCTCATTCCA CGACACGATC CCAACCAACC GGTCCGAGTT GTGGAAACGG ACGCCTTTTT CAATCTCTTT CACTTTGGCC CCTGCTTCGA AAAGGACAAT GCGATAGTAT TGCACGGTTC TGTGTTTGAC CGATACGAAT TTGGCGGGGA AATGGGCTTT GATGGTCCCA CTCAAACGTT TGATCCTATT GCCTGGGGCT CATCCGGTGG TAAGGCTCCA CCACCCCGAC TGGACAAATT TGTCATCGAC AGTACAACGT TCGAGCTGAC CGCAAAGACA CGGATTCCAA TTGTAGACCC CTTCTCGGGT CAAGACATTC CGGTTGATAT GCCAACTTTT CGTGGGGACG CCATTGAATG TCGGTACGCT TACTTTCTAG GCGCTTGCCG TCCAGAGGGT TGGTTTCCCT TCCGATCCAT TGTCAAGTTG GACTTGGAAA CGTACGAGAC ACACAATTGG GATGCCGGCG AGGAACAGGT CGTGAGCGAA CCCATGTGGG TGCCGAAATC ATCGGAAGAA AACAAGCTTG ACGAAGGCTT TGTGCTGAGT GTCGTACACG ATGCCGAAAC AAAATCCTGT CGATTGAACG TTTGGGACGC GGTGACGTTT GATCAAGGTC CGATTGCGTC CGTACCTTTG GGAGCCTTGA CACCCTGGTG CGTCCACGGC AGCTGGACGC CCGAGTACAA TCCAGGAAAG ATCAGTTGA
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Protein sequence | MAEASTIHNP DLFQNFMSTK GTYYLNGLAS CQVGDRIMHP FEAHGHCKSM VFDGQGSLHL TSHLIETPLT QKEIQTNQPV ARGVMSTLAD PTTLWGMLQN ALSPTERDTA NLVASLWPPP SEATGITTNP LLITCTDNGE PYVLDPKTLK TKGKLTEVVP KLGSILDGKK CLAHTRYDPV RKHWILCVNE MDIPGENYMG NSTMIFYELD INFDVVSSRS YTTRFMVFHD WVITENYYVV PQNPARIKWA ELGKFLLGAT VGTDIFGMEE ATNGAFLLIP RHDPNQPVRV VETDAFFNLF HFGPCFEKDN AIVLHGSVFD RYEFGGEMGF DGPTQTFDPI AWGSSGGKAP PPRLDKFVID STTFELTAKT RIPIVDPFSG QDIPVDMPTF RGDAIECRYA YFLGACRPEG WFPFRSIVKL DLETYETHNW DAGEEQVVSE PMWVPKSSEE NKLDEGFVLS VVHDAETKSC RLNVWDAVTF DQGPIASVPL GALTPWCVHG SWTPEYNPGK IS
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