| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_33013 |
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| Symbol | |
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| ID | 7197020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011670 |
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| Strand | + |
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| Start bp | 1312570 |
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| End bp | 1314285 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177804 |
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| Protein GI | 219112105 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0011992 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTTG GTCGAAAGCA GCTGCCACGC CGGCGCAAAG CAACGGGTCC ATTGCGACTC
GATTGGCCTG CCGTCGGCGC CTCTCAAGAT CTCGTCGGCA CCAAAGATCT TGTGTCGTTT
TCACTGGAAG AAAGTGCATT CGTTCCAGTG CGTCGGAAGC AAAAGCGACC ACGCAAGAAT
GCAGTCTCCC ATACCGGAGG TGACACTAGT TCACATGACA ATGCTCTTTG GATCGATAGG
TATAATCCTC AATGTATAGC CGATGTCTGT GTGGCGCCAA AAAAAGTTCA GGAAGTTCGT
CAATGGATCC AGTCTGCCAT GAAAGATCAC GTTCACAAAC TCTTAATATT GGTAGGGAGC
CCTGGAATTG GTAAGTCGAC AATGATCCGT TGTTTGGCGA AGGAAAATAG ATGGTCAATC
TCTGAATGGA ACGAAACGTT CTCGAATCAA TACAGTGCTT TGAACTCGGC AATGCACTCT
GTAGATCAAC AGTCTTCTCT GAGCTCGTTT CAGGAGTTTC TCCGGCAAGC AGGGACCGGC
TACCATTCTC TGACCTTCGA ATCGTCGTCA AATTCATCAA CAAAGCAAGA CGGATCTCAA
ATTTCGGGGT CCATCATCTT GCTTGAAAGC CTTCCGACGC AACACGAATC AACCCAGATG
CGATTAAGAG AGCTGTTTAC TGAACACGTC CGCACCACAT CCGTGCCAAC GGTTCTCATC
TTCAGCGATG TCTTGGAAGG GAAACACAAA CGAGAGGATC TGGAGTCCTT GGTGGACCCC
AATTTGCTGT ATTCAGACCT TTGCCTCATT CTACAAATTC AGCCTTGTAC TAAGCAAAAC
ATGAAAAGGG TTTTGTCGCT TATTGTCCGT GCAGAAAGGC TTTCGGTACC TTCCAGTATA
TACGAAGACC TTCACGAGCG GAGCAACGGG GACTTGCGCT CGGCAATCAC AACTTTTCAG
TACGAAGCCA TGGGGCAGTC GATGACCGTA AAGAACACAG ATACAACCAA CCGAGACCGC
AGACTTTCGC CATTTCACGC CTTGGGTAAG CTCCTTTACG CGAAGCGCGT CACTGGTGCA
CACAAGGATC CATTAAGTTG GTGGAAATGG AAGGATGATC GTCCACCAAT CGACTTTAAT
CCGGAAAACG TACTGGAGCA TAGTGGGATT GAACAATTTG GGACTCTATC GTTTCTCGAA
CATCACAGTC CGGATTTCTT TTCCGACATA TCGGAGCTGA GCGATACACT CGCGACTTTT
TCAGATTCGG CGTTATTGAT GGACTGTTCC TCTATTTCTG GCTCCCAGAA TGCTGCCGCC
TCGTTGGCTG GCCGTGCCGT CGCCGCCTTC AATCGACATC CACGCGCAAA CAAATTCAGG
CAACTTTCTG CTCCCAAAAT TTTCGAAGTC AATCGCAACC GTCGGGAAAA TGAAGTGCAC
CTTCGTCACC TACACCATTC TTTATCAACG AATCGTAGCA ATGAACTTTC TTTGCATTCG
GCCCTCGGAG CAACTTCGCA CTTCGTCTCC GACAGCCTTT CGTTTCTCCG ACGCATCATC
CCCGAGTCAA TAGATCTGTC TCTGAATACT ATGCACTCAC GATTCCGTCT TATAGACAAA
TCCATCTCGA GCAGCAATGA TGCGAAAACA GGATTGTTAA AGGAGCAGCA GCAAGTGCTT
CTGGACGACG ATATTGGTGA TTTTGATTCA GAATAA
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| Protein sequence | MKLGRKQLPR RRKATGPLRL DWPAVGASQD LVGTKDLVSF SLEESAFVPV RRKQKRPRKN
AVSHTGGDTS SHDNALWIDR YNPQCIADVC VAPKKVQEVR QWIQSAMKDH VHKLLILVGS
PGIGKSTMIR CLAKENRWSI SEWNETFSNQ YSALNSAMHS VDQQSSLSSF QEFLRQAGTG
YHSLTFESSS NSSTKQDGSQ ISGSIILLES LPTQHESTQM RLRELFTEHV RTTSVPTVLI
FSDVLEGKHK REDLESLVDP NLLYSDLCLI LQIQPCTKQN MKRVLSLIVR AERLSVPSSI
YEDLHERSNG DLRSAITTFQ YEAMGQSMTV KNTDTTNRDR RLSPFHALGK LLYAKRVTGA
HKDPLSWWKW KDDRPPIDFN PENVLEHSGI EQFGTLSFLE HHSPDFFSDI SELSDTLATF
SDSALLMDCS SISGSQNAAA SLAGRAVAAF NRHPRANKFR QLSAPKIFEV NRNRRENEVH
LRHLHHSLST NRSNELSLHS ALGATSHFVS DSLSFLRRII PESIDLSLNT MHSRFRLIDK
SISSSNDAKT GLLKEQQQVL LDDDIGDFDS E
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