Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_31942 |
Symbol | dsCYC1 |
ID | 7196501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | + |
Start bp | 1303065 |
End bp | 1304057 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | |
GC content | 45% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002176760 |
Protein GI | 219110016 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGCATT CCAACGATCC TCTTCTAAGC TTACGAATGA AATGCGCTGT TGGACTATCG ATGAATCCAC ATAATCATGA AAATGCAAGA GACGAAGTAT CAGCGATGCT GGATCAAGAA CGTTTCTATC AATGCGGAGA CTATCTTGGA CGACGGAATG TTCGGAAAAA TGAAAAATCT GGAACCAGCG TCAGATCTGT CTCGGAAGAG AATGAAGTAC TAGACGGTGT CTGTCGCGAA AAGATGTGCG AATGGAGCTA CCGAGTTTGC GAACACTTCA ACACGAATCG GGAGATCGTT GCCATCGCCA TGAAATTTCT TGATCGCTTC ATCGATCATT GCAGTTGCGA TCGGAATGCT TTTAAGCTTG CTGCAATGAC AACACTCTAC ATGGCGACGA AATTATTTAA TCCAAAACAA ATACCGATCG GTAGCCTTGC GGACTTGAGC CGTGGAGAAT TTGAAAATAG TAATATTGCG GAAATGGAGC TTGTCATTTT GAAAACTCTG GATTGGCGAT TGAATCCACC CACTGTGCTG TCCTTCATCA ACAGGTTCCA CTCATTGCTC TGTATCGAAG AAGTATCCAC GGCCAAAGAT ACTCATCGTA GAGCAACATT CTTCGCCGAG CTCTCTGTTT ATGACTACAG CCTCGTTACA GAAAATGCGA GTTTGTTGGC GATTGCCTCC CTTCTGAATG CCTTTGAAGG ATTGGAGGAC CCATGTTTTG CTGATGTGTT GCATACCAAT CTAAACGAGC TCGTGCAATG TCAATTGTCT TTGGTTGTGG ACGTACTCGC AGTAGAGAAA GTTCAGTCTC GATTGTGGTA TCTCTACAGC TGTTCGGCTC AGGTAAAAGC AGACGGAATT ATTCCATTGC GTGTGTGTCA GGAGAGGCAA CAACGACACG AAGCCAAGAT ACACCCGAGT GGTAAAGATG AAGCGCTGAT GGATTCTCCT ATTAGCGTTA ATCTTCACGA GCGGTATTGC TGA
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Protein sequence | MVHSNDPLLS LRMKCAVGLS MNPHNHENAR DEVSAMLDQE RFYQCGDYLG RRNVRKNEKS GTSVRSVSEE NEVLDGVCRE KMCEWSYRVC EHFNTNREIV AIAMKFLDRF IDHCSCDRNA FKLAAMTTLY MATKLFNPKQ IPIGSLADLS RGEFENSNIA EMELVILKTL DWRLNPPTVL SFINRFHSLL CIEEVSTAKD THRRATFFAE LSVYDYSLVT ENASLLAIAS LLNAFEGLED PCFADVLHTN LNELVQCQLS LVVDVLAVEK VQSRLWYLYS CSAQVKADGI IPLRVCQERQ QRHEAKIHPS GKDEALMDSP ISVNLHERYC
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