Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_29532 |
Symbol | |
ID | 7203592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011685 |
Strand | - |
Start bp | 332944 |
End bp | 334519 |
Gene Length | 1576 bp |
Protein Length | 237 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182946 |
Protein GI | 219125350 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0486928 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CCGCTCAACG ATCAGTTGGA CGACAGCCAG TTGGCGGCCG TTGCGTTTTG CCACACGAAC CACCGACCCG TTGCGTTGAT TCACGGTCCA CCCGGAAGTA CGTAGGCACC AGGCACACAA CGGTTCGGGA AGGCTTTGGA TCCCACACTC GATCTGACAC CCAGCGACTT TTTTACTATT TCCCCGTTTT TTTTTCGCAG CTGGAAAAAC AACGACAGTC GTTGAACTCA TCCAACAGGC CGTCCACACG TTTCACAAGA AAGTGCTAGT GGCCGCCCCC AGCAACGTGG CGGTGGACAA CGTGTTGGCC AAACTCGTCG CGTCTTCCGA GGGAGCTCCA CCAGCCGCTT CCCGCAGACG GCGAGACCAA AATAGCAAGC CGAAATTGCG TGTGGTACGT TTGGGTCATC CGGCTCGGTT GCAGGCCAAC ATTCTGCCCT ACAGTCTCGA AGCCTTGGTC CAAGCGTCGG ATGCCACCGA GATTGTGGCT GACGTTCGCC AGGAGCTGCA AAACTTTCTA CGCATTGCTT CGAATTCCAA AGCACGCTAC AGTGACAAGC GTGTCGCCTA CCGCGAGATC AAAGCCCTGC GGAAAGAAGT CCGGGTCCGG GAAGAAAAGG TGGTCGCCTC GCTGTTGCAG CATGCGCATG TGGTACTGAC AACGTGCGTC GGAGCAGCGA ATAAGCTATT GAATGACGTG GACTTTGACT TGGTCGTCAT TGATGAAGCG GCACAGGCCC TGGAGGCGGC TTGTTGGATT CCTGCCTTGC GCGGGAGAAA GCTCGTGCTA GCCGGGGATC ACTGGCAATT GCCGCCCACG ATCAAAAGCA GCCGTCGTGT TGTTCAACAA GGCTTGGGAA AGACCATGTT TGCGCGTGCC ATGGAATTGT ATGGCGATGA CGATTCGCAG AGAGAACTGG GTCGAGTGTC ACGAATGCTT CGTGTACAGT ACCGCATGCA CAAACTGATC GCGGACTGGG CCAGTCAGGC GCTGTACGGT GGTGCCCTTC AAACGGCAAC AAACGTCCAA AGTCGCACGC TAGCGCAACT AACCGGATGC TTGGATGAAG AGGAAGACTG TTTTGGCGCA GCGTCCAATG CTGCACTTCT TCTAATTGAT ACTACTGGCT GCAATATGCA CGAGTCAGTA AACGCTGCCG GTTCACGATT CAACGAAGGA GAAGCGCAGA TTGTTCGCCA ACACGTACAA ACACTGCTGG ACATGGGCGT ACGACAAGAG CAAATAGCCA TTATTTCGCC GTACAATGGG CAAGTGGAGC TGTTGCGATC CGCACTATTG CCGGATGCTC CGCACTTGGA AATTCGGAGC GTCGACGGCT TTCAGGGTGG AGAACGGGAA GCTGTTGTTT TGAGCCTGGT TCGCAGCAGT GCACGAGGTG GAGTTGATGG AATTGGGTTT CTCGGAGACA ATCGCCGCTT AAACGTTGCA GTGACTAGGG CGAAACGCCA TTGCTGCGTT GTTTGTGATT CCGGAACCGT TTCGAAAAGT CCCTTTATCA GGGGTCTTGT CGATTGGATT GAAGAGCACG GTGAAACTCG AGCAGCTCTT GAGTTT
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Protein sequence | MFARAMELYG DDDSQRELGR VSRMLRVQYR MHKLIADWAS QALYGGALQT ATNVQSRTLA QLTGCLDEEE DCFGAASNAA LLLIDTTGCN MHESVNAAGS RFNEGEAQIV RQHVQTLLDM GVRQEQIAII SPYNGQVELL RSALLPDAPH LEIRSVDGFQ GGEREAVVLS LVRSSARGGV DGIGFLGDNR RLNVAVTRAK RHCCVVCDSG TVSKSPFIRG LVDWIEEHGE TRAALEF
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