| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_29472 |
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| Symbol | Lhcr5 |
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| ID | 7203780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011685 |
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| Strand | + |
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| Start bp | 55344 |
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| End bp | 56395 |
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| Gene Length | 1052 bp |
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| Protein Length | 246 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | protein fucoxanthin chlorophyll a/c protein |
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| Protein accession | XP_002182761 |
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| Protein GI | 219124965 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.058235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TGAGTTTGTT CCGATTCGGC TGGAAACGAT TCGTTAATGT AAGTGAATGA AACGGACGAT
GACACGTTGA CGGTCCAGTA CCGATCGAGT TCGATCAGAA AAAGCCAGCT TTTTCAGAAC
GGCGACGGAG ATCCCTGAAA ATCCAAGACC GTCTAGACAG GTCCATCGCA TGGCACCGGT
CCAGACGGAT CCATCGCATG GTACTGCTCT AGATGGATCT TATTTTGATA GATTACTATT
TTGGTCATAA CTTACAGGAC ATCGCATAAC GTAACCCAAA ACAACACAAA AACAACTTCA
CAGTTAGATA CAATGAAGTA CAGGACATCC ATTCTTTTCT CGGCGTTGGC TACTTCCGCA
ACAGCTTTTG CACCAACGCA AAGCATTACC AGAACGCTCA CTCAAACGAA TATGGCCGAT
TTCAACAAGG ACGATTTCTT GTCGTTCAAG GAAAAAGACA AATCCGGAAA CCTCCCAAAC
GATCGATCTG AAGCCATACC CTTCCAAAAG CGCCCCCATG CTTTGGACGG AACGTTCGCA
GGCGATGTTG GATTTGATCC CATTGGTTTT GCGTCGAGCA AGGAAGATCT CTGGAAGTAC
CGAGAAGCCG AAGTTAAGCA TGGACGTCTC GCCATGCTAG CTTCTGCGGG ATGGATCTTT
GCTGAGCGCT TTGATCGCCC TTTGGCGCAA CTATTTTCAA TGGAACCTGT CTTGGACGCC
TCAAACCGCA ACCCAGCCCT CCTGAACGGC GGTCTTGGTA AGGTCAGCCC TGTTTACTGG
GTTTCGTGCT TGGTTGCCGC CGCGGCCATT GACCTGAACG GGATCGAAAA ATCACGGAAC
GATCCAAACT ACTTTCCTGG GAATTTGGGA TGGGATCCAC TTGGGCTGTA TCCTTCCGAT
CCTTCGGGAC AGCGCCGCAT GCTGCTTGCC GAAATCAAGC ATGGCCGTCT TGCCATGATT
GCCATTACAG CATTTGCCTT TCAAGAGTTT GTTCAGCAGT ATGCTGTGAT AAACCAGACT
CCAATCTTCT TCCAACCAGC GCAGGATGTT GT
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| Protein sequence | MKYRTSILFS ALATSATAFA PTQSITRTLT QTNMADFNKD DFLSFKEKDK SGNLPNDRSE
AIPFQKRPHA LDGTFAGDVG FDPIGFASSK EDLWKYREAE VKHGRLAMLA SAGWIFAERF
DRPLAQLFSM EPVLDASNRN PALLNGGLGK VSPVYWVSCL VAAAAIDLNG IEKSRNDPNY
FPGNLGWDPL GLYPSDPSGQ RRMLLAEIKH GRLAMIAITA FAFQEFVQQY AVINQTPIFF
QPAQDV
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