Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_29004 |
Symbol | |
ID | 7202722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011682 |
Strand | - |
Start bp | 672309 |
End bp | 673801 |
Gene Length | 1493 bp |
Protein Length | 378 aa |
Translation table | |
GC content | 56% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182113 |
Protein GI | 219123605 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0221878 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AGGTGACCAT GGCGTTGCTC TCCGTTGCTT CACTGTAAAG TAGACATTTT CGTGGTTGCA TGCACTTTCC GACGCGCACC GATCCATCCA CGCCCCTTGC TTTCCGTTGA TTGCACGAAT TTCCCAACTC GCTATTCGCA ACGTTGCCGC TAACGATACG CAAAGAACTG CAATTATCCA ATGTCCAGCA ATCGATCCTT ACGACGTTCG ATGAATACTG CAGTCGTCGC CTCGGTCCTT CTTGCTAGAC ATACTACTCG CAGCTGTCGG CCTCGTCCGG CCTTTCTTGT TCCATCGTTT GGCTCGCAAA AGGCAAAATC CACACCGGCC CGTGGGGGGT TTTCGACGAA CGCTGCCGAT CCTTACGGCA TCGTCCGCTC GGCTTCCTTG GACGCTACCG GACCTGATGC CTGGAAGTCG CTTTCGTCAC GAGATTGTCA AAGGCTACTC GAAACGGCGT CGCAAGCAGC CAGAGCGGCG GGAGCCGTCA TCACGGCTCA TCTCGGATGT GCTGCTGAAC TGGAAGCAGG TGCCACGCAC CATTCCTCCC CAGCCATTGA CGTCAAAACC AATATAAAAG ACATTGTGAC CGAATACGAT AAGCAGGCCC AATTGGCGGT CGAGACGATT GTCCGTGCAG CGTATCCCAC GCACTCCTTT CTCGGTGAGG AAGATGTCGA TCCCGGCGCA GCCGCTAGCG AAGCCGCCTT GTCCACGACT GTACAAAATT CCGAGTCGGG CTACGTATGG ATCTGCGACC CGATCGACGG GACGGCCAAC TTTGCCTCCG GACTCCGGTT GTGCGCCGTC ACCATGGCGG TTGTCTACCA AGGAATTACG GTGGTCGGCG TCGTCTACGA CCCGCATGAG GACGAACTCT TTGCCGCAGT GCGTGGACAA GGCGCCACCG TCAACGGCCA ACCCTTGCGC GTTGCCGATA CCGTCACCAA CGTCCACGAC GCCATCGTCA ACGCCGGCTG TCCGGCGGAC CCCGCCGCCT TTGCCACCTC CATGCGTGGC GTCCTGGCGT TGAACGGTAC CTGCCGTGGG ATCCGTGTGG TAGCCTGCAG TGCCTTGACC TTGTCATGGA TCGCGGCAGG CCGTTTGGCG GCACATTTCG GCTACGATTT GTCGAGTTGG GATTTGGCTG CCGGAGCCTT GCTCGTACAA GAGGCGGGTG GTGTCGTGAC GGGTTTGGAT GGATCGGAAT ATCAACTGTC TACCCGTAAC ATGCTCTGCA GTAACGGACA CGTACACGAG GATATTTTGC AAGTATTGCG CGAGGCGGAC GCGGTCTCCT TTCGCCGGTC TCTGTAGACA CATTCGCGGA ATGCAGCAGG TACCGAGTGA CGCACCCTAT CAGAGAATCC AATTGTGGCC CTCGTTCCAT TCGGTGGTTT TGTATCCATG TACTGCATGT GTTTTTCTTT TCTAATTGTG TAAATGAGAT GTGTCGAGAG AAGGTAACAC TACTATAACG AATTCAAAAC TGA
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Protein sequence | MSSNRSLRRS MNTAVVASVL LARHTTRSCR PRPAFLVPSF GSQKAKSTPA RGGFSTNAAD PYGIVRSASL DATGPDAWKS LSSRDCQRLL ETASQAARAA GAVITAHLGC AAELEAGATH HSSPAIDVKT NIKDIVTEYD KQAQLAVETI VRAAYPTHSF LGEEDVDPGA AASEAALSTT VQNSESGYVW ICDPIDGTAN FASGLRLCAV TMAVVYQGIT VVGVVYDPHE DELFAAVRGQ GATVNGQPLR VADTVTNVHD AIVNAGCPAD PAAFATSMRG VLALNGTCRG IRVVACSALT LSWIAAGRLA AHFGYDLSSW DLAAGALLVQ EAGGVVTGLD GSEYQLSTRN MLCSNGHVHE DILQVLREAD AVSFRRSL
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