Gene PHATRDRAFT_24223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_24223 
Symbol 
ID7199364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011699 
Strand
Start bp193010 
End bp194280 
Gene Length1271 bp 
Protein Length361 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185541 
Protein GI219130793 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.267509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGCGATCATA CCGATGTTCC TTATAATCAA TTGTACGAGC GAAGCTTATC CTGGATTTCT 
TCGGAGTATG AATGGCTGGA AAAGATATCT GCACGCATCC TTTCTCCTTC CCCCCGAAGC
ATGTCGTCCA ACGGCACCGC TGCTAGTGCC GTCGATGCCA ACACGTCACC CAGCACAATG
TTGCTTCATG ATCGCATCGC GGCCCGTGTT CAAGAGCGTA ACTCTTGGTC TACTTGGAGG
AAGCACAGCG TAACGGCGGT ACTCAAGTTC TTGACCACCC ACGGTTCTTC CCTTCCGAGG
CTTCCCTTGC AGTCACAGCT CGATGAAGAT TTTCCAGTGC TGAACATGGA GTGGCCCGCT
TTGCAATCTC CCGAGCCGCT GCAAGTAACA TGGCTGGGAC ATGCCTCATG TCTCATCCAA
GCACAGGGTC TCAATATTCT AACGGGTCCA GTCTTTAGCG AGCGCTGCAG TGCGGTGCAA
TGGGCTGGCC CGAAGCGTTA CCGCCCTACT CCGTGCAATA TCCGCGAGCT TCTCAAGCAT
GTCCGACTTG ACACTGTTTT ACTCAGCCAC AATCACTATG ACCATTTGGA CTACAACACA
ATGCAAGATT TGGCTAACTT GTCGGAGTTT TCTCTGACCT TCGTCGTACC CTTGGGTTTG
AAGCAGTGGT TTGAGTCCAA CGTGTCTGGG ATCGATCGAC ACGAGATTTA CGAACTGGAC
TGGCACGAGC CTTGTACAAT CGTTACAAAT AGCGGTAAGA AGCTTGAGGT GACACCCGTA
CCCATGCAGC ACTGGACATC CCGCCATGGC TGGGATCGGG ATCAGACTTT GTGGTGCGGA
TATAGTTTGG TTTGTGAAGA CACCACCAAG GTGCTTTTCC CTGGCGACAC GGGTTGGTTT
GAAGGTCTAT GGGAGATTGG CGAGCGATAT GGACCCTTCG ATGTGGCCAT GATTCCTATC
GGAGCTTACG AGCCTCGAAG CTTTATGAAG CCTCAGCACA CCGATCCGGA AGAAGCAGTG
CTCATGATGG AAGCTGTGCG GGCACGGAAA GGTCTGCCGA TTCATTGGGG TACGTTCCAA
TTGACGAGCG AACACTACTT GGAGCCTCGG GTCAAGCTTG TGGAGGCCAT GGAAAAGTCG
ACGCTATCAA CCGAGACTTT TGCACCATGG CTCATTGGAG AAACCGTTGT CTGCCCGACC
CATTAGGGAC AGCGTCGGCC TCTTTTTGTG TGGAAAGGAC TAAGAGTAAG AACTTTATGA
ATTACTTGCG T
 
Protein sequence
MSSNGTAASA VDANTSPSTM LLHDRIAARV QERNSWSTWR KHSVTAVLKF LTTHGSSLPR 
LPLQSQLDED FPVLNMEWPA LQSPEPLQVT WLGHASCLIQ AQGLNILTGP VFSERCSAVQ
WAGPKRYRPT PCNIRELLKH VRLDTVLLSH NHYDHLDYNT MQDLANLSEF SLTFVVPLGL
KQWFESNVSG IDRHEIYELD WHEPCTIVTN SGKKLEVTPV PMQHWTSRHG WDRDQTLWCG
YSLVCEDTTK VLFPGDTGWF EGLWEIGERY GPFDVAMIPI GAYEPRSFMK PQHTDPEEAV
LMMEAVRARK GLPIHWGTFQ LTSEHYLEPR VKLVEAMEKS TLSTETFAPW LIGETVVCPT
H