Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_24223 |
Symbol | |
ID | 7199364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011699 |
Strand | - |
Start bp | 193010 |
End bp | 194280 |
Gene Length | 1271 bp |
Protein Length | 361 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185541 |
Protein GI | 219130793 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.267509 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CGCGATCATA CCGATGTTCC TTATAATCAA TTGTACGAGC GAAGCTTATC CTGGATTTCT TCGGAGTATG AATGGCTGGA AAAGATATCT GCACGCATCC TTTCTCCTTC CCCCCGAAGC ATGTCGTCCA ACGGCACCGC TGCTAGTGCC GTCGATGCCA ACACGTCACC CAGCACAATG TTGCTTCATG ATCGCATCGC GGCCCGTGTT CAAGAGCGTA ACTCTTGGTC TACTTGGAGG AAGCACAGCG TAACGGCGGT ACTCAAGTTC TTGACCACCC ACGGTTCTTC CCTTCCGAGG CTTCCCTTGC AGTCACAGCT CGATGAAGAT TTTCCAGTGC TGAACATGGA GTGGCCCGCT TTGCAATCTC CCGAGCCGCT GCAAGTAACA TGGCTGGGAC ATGCCTCATG TCTCATCCAA GCACAGGGTC TCAATATTCT AACGGGTCCA GTCTTTAGCG AGCGCTGCAG TGCGGTGCAA TGGGCTGGCC CGAAGCGTTA CCGCCCTACT CCGTGCAATA TCCGCGAGCT TCTCAAGCAT GTCCGACTTG ACACTGTTTT ACTCAGCCAC AATCACTATG ACCATTTGGA CTACAACACA ATGCAAGATT TGGCTAACTT GTCGGAGTTT TCTCTGACCT TCGTCGTACC CTTGGGTTTG AAGCAGTGGT TTGAGTCCAA CGTGTCTGGG ATCGATCGAC ACGAGATTTA CGAACTGGAC TGGCACGAGC CTTGTACAAT CGTTACAAAT AGCGGTAAGA AGCTTGAGGT GACACCCGTA CCCATGCAGC ACTGGACATC CCGCCATGGC TGGGATCGGG ATCAGACTTT GTGGTGCGGA TATAGTTTGG TTTGTGAAGA CACCACCAAG GTGCTTTTCC CTGGCGACAC GGGTTGGTTT GAAGGTCTAT GGGAGATTGG CGAGCGATAT GGACCCTTCG ATGTGGCCAT GATTCCTATC GGAGCTTACG AGCCTCGAAG CTTTATGAAG CCTCAGCACA CCGATCCGGA AGAAGCAGTG CTCATGATGG AAGCTGTGCG GGCACGGAAA GGTCTGCCGA TTCATTGGGG TACGTTCCAA TTGACGAGCG AACACTACTT GGAGCCTCGG GTCAAGCTTG TGGAGGCCAT GGAAAAGTCG ACGCTATCAA CCGAGACTTT TGCACCATGG CTCATTGGAG AAACCGTTGT CTGCCCGACC CATTAGGGAC AGCGTCGGCC TCTTTTTGTG TGGAAAGGAC TAAGAGTAAG AACTTTATGA ATTACTTGCG T
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Protein sequence | MSSNGTAASA VDANTSPSTM LLHDRIAARV QERNSWSTWR KHSVTAVLKF LTTHGSSLPR LPLQSQLDED FPVLNMEWPA LQSPEPLQVT WLGHASCLIQ AQGLNILTGP VFSERCSAVQ WAGPKRYRPT PCNIRELLKH VRLDTVLLSH NHYDHLDYNT MQDLANLSEF SLTFVVPLGL KQWFESNVSG IDRHEIYELD WHEPCTIVTN SGKKLEVTPV PMQHWTSRHG WDRDQTLWCG YSLVCEDTTK VLFPGDTGWF EGLWEIGERY GPFDVAMIPI GAYEPRSFMK PQHTDPEEAV LMMEAVRARK GLPIHWGTFQ LTSEHYLEPR VKLVEAMEKS TLSTETFAPW LIGETVVCPT H
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