| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_18398 |
|---|
| Symbol | |
|---|
| ID | 7197043 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011670 |
|---|
| Strand | - |
|---|
| Start bp | 1419212 |
|---|
| End bp | 1420543 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002178139 |
|---|
| Protein GI | 219112775 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CGACTTCACC ATGGCGCCTC TTCGACTGGT TTTGCAAAGA GCTTCCCCTC GCGTTGCCAT
TTTGTACGTG CCATAGACTT TGTTTTAAAT GATAAGAGGA CACGGGAGAA AGACGCAGCG
ATTGCGTCTA AATCAACCCT AGACGGTTGA CTCCGAGTGA TCTACGCCTC TTTTGTGTGT
AGGATTCCGT CGTTAATGGA TTCCCTATGG TGTTTTGCAT CCCAGAGGGG TCGCGACTCG
ACCGTGGCTA CAGTACGGAA CATCCTGTTT TCTTCTCTTG GTTCCTAGAC TTACCCCTGT
GCACATTCTC TTTTTGAATA GGGCAACGCG TGGTATGGCA ACTGAAAAAC AGAGTAAGTT
TGCCGTAAGA TGATCCACGG CAGATTTTGG TTCTTTCGTG TGGAATGCAG GTTGGATTGT
GCGTTTCTTT TGCTCATTTA CGTTTTCTGT TGTTAGTTTT CAATCAGATC CAGTCGACAA
AGAATCTTAG CAAGATTACT AGCTCGATGA AGATGGTTTC CGCTGCCAAG CTCAAAGGTG
ACGAAAATCG TCTCGCTCGG GCCGTTCCGT TCAATGGTTG GACGTCCGAA CTTGGTGGTG
CGCCGAAGTT GGTGGAGGGT GCTACTTTTG ATGAGCTACC GCAGAAGGTA TTGATCGTTC
CGTTCACTTC TGACAAGGGA CTTTGCGGCG GTGTCAACTC TTACATCACG CGTGCAGTGC
GCAATTGTAT TAAGAAGCTT CAGGCTCAGG GAAAGGACGC AGACATTGTC CTGATTGGAG
ACAAGGGCCG TGCTCAGCTT CGTCGTTTTC ACCCGGAGAA GATCGTTCGA TCTGCTACTG
ATGTTGTAAC ACCCGGAACC TATGCCCTCG CTTCTGGGCT GGCATCGGAA CTCATAGCGT
CCGGCGCAGC GTCTGACTAC GATGCTGTTG TTATCATATA CAATTCCTTC GTCAACGCTG
CCACTTACAA TCAGATGTAC AAGGTTGTAA CTCCGTTTGT TACGATGTCC GAGACTGAAG
AGAGTCTTTC CGGCTACGAA TTCGATGGCG ACAAAGCTGA AGCCATGGAG GATTTGTACG
AGTACATGCT TGCCTCGCAG GTGTTTCACT CGTTCATGGA TTCCGCCGCT TCGGAACAGT
CGTCGCGCAT GACTGCGATG GAGAACGCTT CCAAGAATGC CAACGAGATG GTAGACTCTC
TGACCTTGAA GTACAATCGT GCTCGTCAAT CTCGTATTAC GACGGAACTC ATTGAGATTA
TCTCTGGAGC TTCGGCGCTC GACGGCTGAG TATAGTACCA CAACTAAGAA TCTAATTATA
TTTTGACCAA GC
|
|---|
| Protein sequence | MAPLRLVLQR ASPRVAILAT RGMATEKQIF NQIQSTKNLS KITSSMKMVS AAKLKGDENR
LARAVPFNGW TSELGGAPKL VEGATFDELP QKVLIVPFTS DKGLCGGVNS YITRAVRNCI
KKLQAQGKDA DIVLIGDKGR AQLRRFHPEK IVRSATDVVT PGTYALASGL ASELIASGAA
SDYDAVVIIY NSFVNAATYN QMYKVVTPFV TMSETEESLS GYEFDGDKAE AMEDLYEYML
ASQVFHSFMD SAASEQSSRM TAMENASKNA NEMVDSLTLK YNRARQSRIT TELIEIISGA
SALDG
|
|---|
| |