Gene PHATRDRAFT_17936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_17936 
Symbol 
ID7196959 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp2416246 
End bp2417270 
Gene Length1025 bp 
Protein Length206 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002176975 
Protein GI219110447 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.572241 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CACGTACCTT TCTCAATTTT CCCTCGCGTT TGCATCTACC GTCACAAACT TGGTCGTCCA 
ATCAAGCTTA CTTCGTGGTG GCCTTACGAC CAAAGAATCA TGGCCAATTT TGGGGAGCTT
GTCCTTGTGT TGGGTGATGT GCACATTCCT GAGCGTGCTT CCAAAATCCC AGCGCCGTTG
AAGCGCATGT TGGTCCCCAA TAAGATGCAA CACGTCATTT GCACGGGAAA TATTTCAACG
GAAATGTACG AGGAACTCCG AACCTTGGCA CCTAATGTGC ACATTGTCGC TGGGGATTTC
GATACGACAG AAATGGTGTT CCCGGAAACT CGTGTCGTTC AGGTAGGGGC ATTTCGTATT
GGCGTAGTTC ATGGACATCA GGTCCTGCCG TGGAAAAATC AAGATGCTGC CGCACGGATG
CGTCGAAAAT TGAACGTAGA CATTCTCATT TCGGGACACA CACATCAGAA CGAGGTTACT
TTACTGGACG AATCCTACTA TCACATCAAT CCGGTAAGTC GTTCTACTCG AGAGTGGGCG
AAGTAGCCAC CGTATGGACG ATACCTGACA ACTTCTCTGG CTCTCGTTTT TCTTTTTGGG
TATAGGGATC CATAACAGGA GCCTTTTCGT CTTTGACCGA GCAGGTAACA CCCTCATTTA
TTTTGCTAGC CGTACAGGAC AAGAAAGTAG TTTGCTACGT GTACGAGTTG GTCAATGGAG
AAGTGGAAGT GTCCAAGACA GATATTTCCA AGAGCGAGGC ATCGCAGTCT TCGTCGGCTA
ACAGCTCCCT TATGGCTTCG CTCTTGACAT AGAACTTGAT CTGTTGGGTC CAAGTGCGGC
GATGCTGCAA AGTTTTAAGT GACCCTTGTT TTACCCTTGT GCTGTCGTCG CAATGCTAGA
ACGCCACATT GAAGCCCGAT ACGACCATCA TGCATTCTCC GTAGCACCAC TCCGTTCTCG
AGACCCACGA AACGAAACAA CGGAAAACGT TTCGAGCAAT ATTTTTAATT CTATACCATT
ATACC
 
Protein sequence
MANFGELVLV LGDVHIPERA SKIPAPLKRM LVPNKMQHVI CTGNISTEMY EELRTLAPNV 
HIVAGDFDTT EMVFPETRVV QVGAFRIGVV HGHQVLPWKN QDAAARMRRK LNVDILISGH
THQNEVTLLD ESYYHINPGS ITGAFSSLTE QVTPSFILLA VQDKKVVCYV YELVNGEVEV
SKTDISKSEA SQSSSANSSL MASLLT