Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_17936 |
Symbol | |
ID | 7196959 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | + |
Start bp | 2416246 |
End bp | 2417270 |
Gene Length | 1025 bp |
Protein Length | 206 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002176975 |
Protein GI | 219110447 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.572241 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CACGTACCTT TCTCAATTTT CCCTCGCGTT TGCATCTACC GTCACAAACT TGGTCGTCCA ATCAAGCTTA CTTCGTGGTG GCCTTACGAC CAAAGAATCA TGGCCAATTT TGGGGAGCTT GTCCTTGTGT TGGGTGATGT GCACATTCCT GAGCGTGCTT CCAAAATCCC AGCGCCGTTG AAGCGCATGT TGGTCCCCAA TAAGATGCAA CACGTCATTT GCACGGGAAA TATTTCAACG GAAATGTACG AGGAACTCCG AACCTTGGCA CCTAATGTGC ACATTGTCGC TGGGGATTTC GATACGACAG AAATGGTGTT CCCGGAAACT CGTGTCGTTC AGGTAGGGGC ATTTCGTATT GGCGTAGTTC ATGGACATCA GGTCCTGCCG TGGAAAAATC AAGATGCTGC CGCACGGATG CGTCGAAAAT TGAACGTAGA CATTCTCATT TCGGGACACA CACATCAGAA CGAGGTTACT TTACTGGACG AATCCTACTA TCACATCAAT CCGGTAAGTC GTTCTACTCG AGAGTGGGCG AAGTAGCCAC CGTATGGACG ATACCTGACA ACTTCTCTGG CTCTCGTTTT TCTTTTTGGG TATAGGGATC CATAACAGGA GCCTTTTCGT CTTTGACCGA GCAGGTAACA CCCTCATTTA TTTTGCTAGC CGTACAGGAC AAGAAAGTAG TTTGCTACGT GTACGAGTTG GTCAATGGAG AAGTGGAAGT GTCCAAGACA GATATTTCCA AGAGCGAGGC ATCGCAGTCT TCGTCGGCTA ACAGCTCCCT TATGGCTTCG CTCTTGACAT AGAACTTGAT CTGTTGGGTC CAAGTGCGGC GATGCTGCAA AGTTTTAAGT GACCCTTGTT TTACCCTTGT GCTGTCGTCG CAATGCTAGA ACGCCACATT GAAGCCCGAT ACGACCATCA TGCATTCTCC GTAGCACCAC TCCGTTCTCG AGACCCACGA AACGAAACAA CGGAAAACGT TTCGAGCAAT ATTTTTAATT CTATACCATT ATACC
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Protein sequence | MANFGELVLV LGDVHIPERA SKIPAPLKRM LVPNKMQHVI CTGNISTEMY EELRTLAPNV HIVAGDFDTT EMVFPETRVV QVGAFRIGVV HGHQVLPWKN QDAAARMRRK LNVDILISGH THQNEVTLLD ESYYHINPGS ITGAFSSLTE QVTPSFILLA VQDKKVVCYV YELVNGEVEV SKTDISKSEA SQSSSANSSL MASLLT
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