Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_13175 |
Symbol | |
ID | 7201869 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011678 |
Strand | - |
Start bp | 854237 |
End bp | 855496 |
Gene Length | 1260 bp |
Protein Length | 391 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181086 |
Protein GI | 219120706 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCTTC AGGATCGAAT CGGTGTCCTG TCTGATGTTC TCAAATATTT TTGGAAATAC GACGTGAACG TCTGTCGCAT TGAATCTCGT CCGCTTCATG TGGGACGCTT GAGCAAACGA CGGTTTGACT TTTTTGTCGA TTTTGAAGGG AGTCCGTCCG ATGCGAACGT CACCAAGCTG CTCGATGCAT TACACTCCAT GACAGACAAG CTGCTTATTT TGGATGAGAA ACAAGTGCAT TGGTTTCCTC GTCATATCTC GGAACTCGAC TTGATCGCAG ATCGTACTCT TATAGCTGGG ACTGATTTAG AAAGTGATCA CCCTGGCTTT CACGATCTGG TACGTAGGTA GACGTGACGA GAACAATATC AATCGAACAA CCTGTCGTGT ACCCTACTTA CGAATTACGT TATTCTGTCT GCGCAGGAAT ACCGAATTCG TCGTGAGAAA CTGACGGAAA GCGCTAGAAA TCATCGATGG GACCAGCCTA TTCCTCGAAT TGAATACTCT CCCGAAGAAA CCTCCGTTTG GACAACCGTT TGGGACCGCA TGGAAACATT GTGGGAATAT CACGCTTGTC AGGAATATCT CACAGCATTG GACCACATGA AAACGCACTG TGGCTACGGC CGGGAAACAA TTCCGCAACA GCAAGACATT AGCGACTATT TAATGCAGCA AACAAACTTT CGCATGCGAC CGGTGGCCGG CCTCCTGTCC TCGCGTGACT TTTTGAATGG CCTCGCCTTT CGTGTCTTTT TTTCCACACA GTACATTCGG CACCACAGCA AGCCACTGTA CACTCCTGAA CCCGATATTT GCCACGAACT GCTGGGCCAC GCTCCCATGT TTGCCGATAG AGATTTTGCA GATTTTTCGC AAGAGATCGG GCTTGCCAGT CTAGGGGCCT CTGACGAAGA TATTCTGAAA TTGGCCCATT GTTATTGGCA TTCCGTTGAA TTCGGTCTCT GCGAGGAGAA TGGCTCGCCC AAAGCGTACG GTGCCGGCCT TTTGTCCTCG TTCGGAGAGC TTGAATACGC CTGCAGTCCC TCACATCCGG GAGGAGATCG GGCTCCTCAA ATCCTTTCCT GGGATCCGGA GATCGCCTCG CGTCAAGAGT TCCCCATCAC GTCCTACCAA CCCGTGTACT TTTTGGCAGA ATCATTACAG GATGCCAAGC AGAAAATGAG ACGGTATTGT GAAGATTTGC CACGTCCTTT TTTTGCCCTT TATAACTCTC AAAACCATAC GGTTCATATT
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Protein sequence | MELQDRIGVL SDVLKYFWKY DVNVCRIESR PLHVGRLSKR RFDFFVDFEG SPSDANVTKL LDALHSMTDK LLILDEKQVH WFPRHISELD LIADRTLIAG TDLESDHPGF HDLEYRIRRE KLTESARNHR WDQPIPRIEY SPEETSVWTT VWDRMETLWE YHACQEYLTA LDHMKTHCGY GRETIPQQQD ISDYLMQQTN FRMRPVAGLL SSRDFLNGLA FRVFFSTQYI RHHSKPLYTP EPDICHELLG HAPMFADRDF ADFSQEIGLA SLGASDEDIL KLAHCYWHSV EFGLCEENGS PKAYGAGLLS SFGELEYACS PSHPGGDRAP QILSWDPEIA SRQEFPITSY QPVYFLAESL QDAKQKMRRY CEDLPRPFFA LYNSQNHTVH I
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