Gene PHATRDRAFT_12752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_12752 
Symbol 
ID7201344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp294656 
End bp295699 
Gene Length1044 bp 
Protein Length348 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180407 
Protein GI219119288 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GGCGTTGTTG GTCTGAGAAA TCTTGGGAAT ACCTGCTTTC TTAACAGTAG TTTGCAGTGT 
TTGAGTGCTA CTATTCCACT CACCGACTAC TTTTTGGGTT ACGACTACCG ATCCGAAATC
AACCAGCACA ACGTTTTGGG AACGGGGGGT AAACTGGCGA CGGCCTACGC GGAACTCATG
AAAGAGCTCT GGTTACAGGC GGCCCCCGTT AGCGGCTACA CCAAAATATC AGCACGAGTA
GTCAAACCGA CGCGATTCAA AAGCAGTCTC GAGAGTTTCG CCCCACAGTT TCTCGGTACG
TCGCAACACG ATGCCCAAGA ATTGCTGTCC TTTTTATTGG ACGGTATTCA CGAGGACTTG
AATCGCATTC CTAAGAAGCC ATATATTGAA GATCGAGATT GCGACGGCAC TCATGATGAG
CGTGATGCGA TTGAAGCTTG GAAAAACTAC CTGCGCCGCG ACAAGTCCCT GGTGGTGGAC
ATTTTTCAAG GTCAACTGCG CAATACCTTG ACGTGCTTGA CCTGCCGGCA CGTCAACGTG
CGCTTCGAAC CCTTCATGTA CCTCTCACTC CCATTGAACG ACGACAGCCA CACTCTCGAT
GATTGTCTGC GCCTCTATTT AGCGGAAGAA CGATTAGTTA GAGAGAATCA ATGGTACTGC
AGCGTTTGTC AAACGCACCG GGACGCTACG AAAAAGACCG ACTTGTGGAT CGTTCCAGCT
ATTTTGATTG TCCATCTCAA ACGCTTTAAG TTCAACGAAT ACGGTCAGCT AGGCTCGAAA
AACAATGCTT GTATTAGGTA TCCCGTGGGT GACTCATGGG ATTTGTCCGG AGTGGTATGC
AGTCGGGGGA GCGAAGAACC CCTCTACGAT TTGTACGCAG TTTCAAACCA CGTCGGGGAT
CTGGGTGGGG GACACTATAC GGCATATTCA CTCAATCGCT TCGACGACCA CTGGTACGAA
TTTAACGATA CCACTTGTCG CAAGATCGAT GATCGAACGC TCCAAGGCAA TTCATCGTCG
GCCTATTTAT TATTTTACAA TCGC
 
Protein sequence
GVVGLRNLGN TCFLNSSLQC LSATIPLTDY FLGYDYRSEI NQHNVLGTGG KLATAYAELM 
KELWLQAAPV SGYTKISARV VKPTRFKSSL ESFAPQFLGT SQHDAQELLS FLLDGIHEDL
NRIPKKPYIE DRDCDGTHDE RDAIEAWKNY LRRDKSLVVD IFQGQLRNTL TCLTCRHVNV
RFEPFMYLSL PLNDDSHTLD DCLRLYLAEE RLVRENQWYC SVCQTHRDAT KKTDLWIVPA
ILIVHLKRFK FNEYGQLGSK NNACIRYPVG DSWDLSGVVC SRGSEEPLYD LYAVSNHVGD
LGGGHYTAYS LNRFDDHWYE FNDTTCRKID DRTLQGNSSS AYLLFYNR