| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_12379 |
|---|
| Symbol | |
|---|
| ID | 7201100 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011676 |
|---|
| Strand | - |
|---|
| Start bp | 485797 |
|---|
| End bp | 486463 |
|---|
| Gene Length | 667 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002180247 |
|---|
| Protein GI | 219118961 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TGGGCCGCCT ACAATGATGC GCTGGATAGC AAACCGCTCT TTACCAAGGC CATGACTTCG
CTCGTGGGAT GGGGGCTCGG GGATGTTCTG GCTCAGGTAC GTTTCGATTC CAGGGCTCAA
TCAATGGATC AATTCACCGG AAAGCTCTCG TTTCGTACGG TCCCGTCCAC ACAACGACGA
CAACGTGCAT CGGTCCGTTC TTTTCTCACC CACCTTTGCT TGGTTCCATT CTGTATCGTC
GCACGATGCG TAGATCTTCA TTTCGGGCGG ACCCTTCGAT TGGAAGCGCT TCGTGACTCT
TTCGGTCTTT GGTTTCATCT ACCACGGACC CTCGGGACAC TACTTCTACA ACTGGCTCGA
CGGCAAGATC AAGGGAACCC GCGCTCAAGA CGTGGCCCTC AAGGTTGGCA TTGATCAGAT
CTTGTGGTGC CCCATCTTCA TGACGGTATT CTTCACCTAC CTGGGCCTCT GCAACGGCGA
CTCCTTCAAC ACCATTGGCA ACAAGATCAA GAATGATCTG TTGTCCGCCT GCCAGGGATC
CTGGAAGGTC TGGCCCATTG TGCACGCCGT CAATTTCAAG TTCATCTCCA GCAAGCACCG
TCTCGTCTTT ATTAACGCCG TCCAGGTTGC CTTCAACATG TTCCTGTCGC TGATTGGAAC
CAAGTAA
|
|---|
| Protein sequence | WAAYNDALDS KPLFTKAMTS LVGWGLGDVL AQVRFDSRAQ SMDQFTGKLS FRTRFVTLSV
FGFIYHGPSG HYFYNWLDGK IKGTRAQDVA LKVGIDQILW CPIFMTVFFT YLGLCNGDSF
NTIGNKIKND LLSACQGSWK VWPIVHAVNF KFISSKHRLV FINAVQVAFN MFLSLIGTK
|
|---|
| |