Gene PHATRDRAFT_12322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_12322 
Symbol 
ID7201091 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp445968 
End bp446687 
Gene Length720 bp 
Protein Length212 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180237 
Protein GI219118941 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.683046 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTCTTAGAGG CAGCACAAGG ATCCGCGCTG GTAGAGCTGG GGCATACGAA AGTGATTGGG 
CAGGTTCTCG GACCTGTTAC GGCCAGCTCG AGCCACCTGC CGCCTTCCCT TCAATTGAAC
ATGGAAGAAG GAGTCATGCA CTTCGAAGTC AAATACGCGC CTCACATTGC ATTCCCAACG
GCAACTTTAT TGGCTTCTAC CGTATCTAGT ATGGATCAAT CCAACCAGCT TCTGTCCACT
GGAAAAATCA ATTCATGGAC TATTGCCAGA GAAACCGACT TGGCTTCCAA CCTCTCCGAT
GCGCTATCCG CCTCGGTTCC GTTGAGACAG TATCCCAAAT GCGCCCTTTT GGTTAAAATT
ACGGTGCTAC AGGATGATGG GAGCATACTA CCAGCATGTA TTACTGCGGC TACTTTGGCA
TTGGCTGATG CCTCTGTGGA AATGTACGAT GTTGTAGCCG CTAGTACTGT TGCCGTATGC
GATGGTTTGC TAGTAGCAGA CCCCACGCTG CGCGAGGTAT CGGCGGCGGA TGCCGTCATG
ACGCTGGCCA TTTTACCCAA CTGGAAGGAA TCGACTCTGT GGCAACAGTC TGGACGCTTG
AATCCGCAAA GGGCAAACGA AGCCATGGAG TTGTGTCGAA ACGGTTGTCG AACGATGCAT
CGGTTTTTGC GGGAGCACCT TATTCAAGAA AACGAGAAAG ACATGGCACA TGAGTCTTGA
 
Protein sequence
VLEAAQGSAL VELGHTKVIG QVLGPVTASS SHLPPSLQLN MEEGVMHFEL LSTGKINSWT 
IARETDLASN LSDALSASVP LRQYPKCALL VKITVLQDDG SILPACITAA TLALADASVE
MYDVVAASTV AVCDGLLVAD PTLREVSAAD AVMTLAILPN WKESTLWQQS GRLNPQRANE
AMELCRNGCR TMHRFLREHL IQENEKDMAH ES