Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG2117 |
Symbol | rpsP |
ID | 2552452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | - |
Start bp | 2225325 |
End bp | 2225903 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637150693 |
Product | 30S ribosomal protein S16 |
Protein accession | NP_906175 |
Protein GI | 34541696 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0228] Ribosomal protein S16 |
TIGRFAM ID | [TIGR00002] ribosomal protein S16 |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.595697 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACAA AAATCAGATT GCAACGACAT GGTCGCAAAG GTTATGCCTT TTATAAGATC GTTGTCGCAG ACAGCAGGGC GCCACGAGAT GGCAAGTTTA TTGAAAGGAT CGGTTCATAC AATCCGAACA CGAATCCTGC TACAATAGAT TTGAATTTCG AGCGCGCTTT GTATTGGATC GGTGTAGGCG CACAGCCTAC CGACACGGCA CGTAATATTT TGTCCCGTGA GGGTGTGCTC ATGATGAAGC ACCTCCTTGG TGGTGTTAAG AAGGGTGCTT TCGATCAAGC TGCAGCAGAA AACAAGTTCG AGGCTTGGTT GAAGGGCAAA AAAGATGCTC TTAACAACAT GAAGGCAAAG GTGAAAGAAG CCGCTGTAGC GGACGATAAG GTTAAGCTCG AAGCAGAGAA GGCCGTAAAC AAGGCTCGTG CAGAAGCTGT GGCAGAGAAA AAAGCCGCAG AGGCCAAAGC TAAGGCTGAA GCAGAGGCTG CTGCCGCTGC CGAAGAAGCT GCCGAAACGG AAGAAACTCC CGTGGAAGCT GCTGCCGAAG AAGCTCCTGC TGCTGAGAGC GCAGAATAA
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Protein sequence | MATKIRLQRH GRKGYAFYKI VVADSRAPRD GKFIERIGSY NPNTNPATID LNFERALYWI GVGAQPTDTA RNILSREGVL MMKHLLGGVK KGAFDQAAAE NKFEAWLKGK KDALNNMKAK VKEAAVADDK VKLEAEKAVN KARAEAVAEK KAAEAKAKAE AEAAAAAEEA AETEETPVEA AAEEAPAAES AE
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