| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG2002 |
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| Symbol | dapB |
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| ID | 2552101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | - |
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| Start bp | 2090961 |
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| End bp | 2091677 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637150584 |
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| Product | dihydrodipicolinate reductase |
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| Protein accession | NP_906074 |
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| Protein GI | 34541595 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0289] Dihydrodipicolinate reductase |
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| TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.180668 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAATAG TACTGATAGG GTATGGCAAG ATGGGACATG TGATCGAACG GATTGCATGC
AGCCGAGGGC ATGAAGTGGT GCTGACGATC GATGCCGGAG AGGAAGATCG TTTCGATTCG
ATAGCGTTTC GTTCGGCCGA TGTAGCCATC GAATTTACCC GTCCGGATGC GGCCTATGCG
AATTGCTCGC GCTGTATGGA TAAGTCCGTG CCGGTGGTGT GCGGGACTAC GGGGTGGACA
GAGCGTCTGC CCGAGCTGGA AGAACGCTGC CGACGGGAGG GAAAGACCCT CTTCTGGGCT
TCGAACTTCA GCATCGGGGT CAATCTTTTT TTCTCGCTCA GTCGTATGTT TGCCCGATTG
ATGAGCCGGC ACGATCAGTA TCGTCCTCAC CTGACGGAAA TCCATCATGT ACATAAGTTG
GACGCTCCGA GCGGAACGGC TATTACACTG GCCGAGGGAT TGATAGCCGA ATCTCCCTCG
CTGGACGCTT GGAGACTGAC GGAGACACCG GAGGAGAACG AACTCCCGAT CACCTCCATC
CGAGAAGGCG AAGTCCCGGG TACGCACAGC ATATCCTATA CATCCGAGGT GGATCGGCTG
ACGATATGCC ACGAAGCTTT TGGTCGAGAG GGATTCGCTC TTGGTGCCGT GTTGGCTGCC
GAATATGCTG CCACGCACAA AGGCTTTCTG ACGATGAACG ATTTAATCAG CTTATAA
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| Protein sequence | MKIVLIGYGK MGHVIERIAC SRGHEVVLTI DAGEEDRFDS IAFRSADVAI EFTRPDAAYA
NCSRCMDKSV PVVCGTTGWT ERLPELEERC RREGKTLFWA SNFSIGVNLF FSLSRMFARL
MSRHDQYRPH LTEIHHVHKL DAPSGTAITL AEGLIAESPS LDAWRLTETP EENELPITSI
REGEVPGTHS ISYTSEVDRL TICHEAFGRE GFALGAVLAA EYAATHKGFL TMNDLISL
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