Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG1993 |
Symbol | uvrC |
ID | 2553185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | + |
Start bp | 2083461 |
End bp | 2085260 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637150575 |
Product | excinuclease ABC subunit C |
Protein accession | NP_906065 |
Protein GI | 34541586 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.589477 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCCG ACGAACTGAA CATCATCCTC CCCACCCTGC CGGAAAAACC GGGTTGCTAC CAGTACTTCG ATGAAGATGG GAAGGTAATC TATGTAGGCA AGGCCAAAAA CCTTCGGCGC AGGGTCAGTT CGTATTTTTA CAAGGAGCAC GCAGACAGGA AAACCCGCAT ACTGGTCAGA CAGATCAGGA GCATCAAATA CATAGTTGTG GACAGCGAAG GGGATGCCCT GCTGCTCGAA AACTCACTGA TCAAAGAGTA TCAACCTCGG TATAATGTCC TCCTCAAAGA TGGGAAGACA TACCCCAGCA TAGTGATCAA ACGGGAACCT TTCCCACGTA TATTCGCCAC ACGGGACATC AAAAAGGACG GATCCGAATA CTTCGGCCCC TATCCGGGCG CACTCATTGC CAAAGGGATG CTCCGCCTTG TGAAAGAGAT CTATCCGATC CGTACCTGCA AACTGGATCT GAGAGAGGAG AAAATCCGAC AAGGACGGTA CCGCGTCTGC CTGCAGTATC ACATCAAGAA ATGCAAAGGC CCCTGCATCG GCAATCAAAC TTCGAACGAG TACGAAAGCA ATGTATCGGA AATACGCGAT CTGCTCCGAG GCAACTTGCA CAGGCTTGTA CGCATGTATC GCGACAGGAT GCAGGTATAC AGCGAAGGAC TGCGCTTCGA AGAGGCACAG ATATGCAAGG AGAGAATAGA GCTTCTTGAG CGATACGAAG CCAAGCACAC GGTCGTACCG CGTAATATAG ACAACGTAGA TGTTTTCTCT TACGACGAAG ACGAGCACAC GGCCTATATC AACTACATGC ACATAGAGCA CGGAGGGATC AATCGTGTGT ACACCTTGGA GTACAGAAAG CAGATAGAGG AATCGAAAGA AGAACTTCTT GCAGCGGCGA TAACAGAGCT GAGACAAAGA TTCGAAAGCA ACGCTCACGA AATCGTTTTG CCGTTCGACA CCGGTTGGCA AACGGGAGAG AGCATCACGA CTACGATCCC CCGACGTGGA GACAAACGGA AACTGCTGGA ATTATCCGAG AAGAACGTAG CTCAATACAA GCTCGACAAA CTCAAACGTG CCGAGAAGCT CAATCCCGAG CAACGCGCCC TACATATCGT CCACGGGATC CAAAAGGATT TGCACTTGGA TCGTCCGCCG AAACATATCG AATGCTTCGA CAACTCGAAT ATACAGGGTA CGAGTCCGGT GGCAGCCTGC GTTGTTTTCA AAATGGGGAA ACCGAGCAAA AAGGATTACC GAAAGTTTCA CGTGAAAACA GTCGAAGGGC CGAACGACTT CGCCTCCATG AGAGAAATCA TCAGTCGGCA TTACACCCGT CTGACGGAAG AGAACTTACC CCTACCCGAC CTGATCGTCG TAGATGGAGG GAAAGGACAG CTTAGCGCAG CGTACGAAAC ATTAGATAAA CTGGGGCTCA TCGGCAAGAT ACCCATCATA GGATTGGCCG AACGTCTGGA GGAAATCTTT TTCCCGAAGG ACCCCGTTCC GCTGATTTTG GACAAGAAAA GCGAAACGCT CAAGGTCATA CAACACCTAC GCGACGAAGC ACACCGCTTC GGGATCGGGT TCCACCGCGA TGTACGAAGT AAGAAACAAA TTCAGAGCGA ACTGGACAAT ATCAAAGGCA TCGGTAAGAA AACAAAAGAA GATCTGCTCC GCCATTTCAA AAGCGTAAAG CGAATACGCT CCGCAGAAGA GGAAGAGCTT AGTGCTCTTA TCGGCCGGAA CAAAGCGAAA CTATTATACG AAGGACTCAG AAAGAAATAA
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Protein sequence | MTPDELNIIL PTLPEKPGCY QYFDEDGKVI YVGKAKNLRR RVSSYFYKEH ADRKTRILVR QIRSIKYIVV DSEGDALLLE NSLIKEYQPR YNVLLKDGKT YPSIVIKREP FPRIFATRDI KKDGSEYFGP YPGALIAKGM LRLVKEIYPI RTCKLDLREE KIRQGRYRVC LQYHIKKCKG PCIGNQTSNE YESNVSEIRD LLRGNLHRLV RMYRDRMQVY SEGLRFEEAQ ICKERIELLE RYEAKHTVVP RNIDNVDVFS YDEDEHTAYI NYMHIEHGGI NRVYTLEYRK QIEESKEELL AAAITELRQR FESNAHEIVL PFDTGWQTGE SITTTIPRRG DKRKLLELSE KNVAQYKLDK LKRAEKLNPE QRALHIVHGI QKDLHLDRPP KHIECFDNSN IQGTSPVAAC VVFKMGKPSK KDYRKFHVKT VEGPNDFASM REIISRHYTR LTEENLPLPD LIVVDGGKGQ LSAAYETLDK LGLIGKIPII GLAERLEEIF FPKDPVPLIL DKKSETLKVI QHLRDEAHRF GIGFHRDVRS KKQIQSELDN IKGIGKKTKE DLLRHFKSVK RIRSAEEEEL SALIGRNKAK LLYEGLRKK
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