Gene PG1688 details

Gene Information

• Locus tag: PG1688
• Symbol: greA
• ID: 2552568
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: -
• Start bp: 1774306
• End bp: 1774776
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637150309
• Product: transcription elongation factor GreA
• Protein accession: NP_905804
• Protein GI: 34541325
• COG category: [K] Transcription
• COG ID: [COG0782] Transcription elongation factor
• TIGRFAM ID: [TIGR01462] transcription elongation factor GreA

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 20
• Fosmid unclonability p-value: 0.833443
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCATACA ATTATATTAC ACAGGAAGGG TACGATAAAA TTTTGGCCGA ATTGGCTGAA 
CTTGAAAGCG TACAGCGACC CGAGATTTCT CGGCAGATAG CAGAAGCACG CGACAAAGGC 
GACCTATCCG AAAATGCCGA GTACGATGCG GCAAAGGAAG CCCAGGGAAT CCTCGAAACG 
AAGATTGCCC AGCTAAAGGG GCTGATCGCC AATGCTCGTA TCATTGACGA ATCGCAAGTA 
AGCACCGAAA GCGTTCAGAT TCTGAACAAG GTGACGATCA AGAACGTAAA GACAGGTGTC 
GTGATGGCCT ATACCCTCGT TTCCGATTCG GAAGCCAACC TCAAAGAGAA CAAAATCTCT 
GTCAATACAC CCATCGCACA GGGACTGATG GGTAAAAAAA TCGGAGATTT GGTTTCGATC 
AAAGTGCCGA GTGGATTGGT AGAATTTGAG ATTATAGACA TTACCTTATA A 

 

Protein sequence

MAYNYITQEG YDKILAELAE LESVQRPEIS RQIAEARDKG DLSENAEYDA AKEAQGILET 
KIAQLKGLIA NARIIDESQV STESVQILNK VTIKNVKTGV VMAYTLVSDS EANLKENKIS 
VNTPIAQGLM GKKIGDLVSI KVPSGLVEFE IIDITL