Gene PG1681 details

Gene Information

• Locus tag: PG1681
• ID: 2552597
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: +
• Start bp: 1766552
• End bp: 1768528
• Gene Length: 1977 bp
• Protein Length: 658 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 637150303
• Product: glycogen debranching protein
• Protein accession: NP_905798
• Protein GI: 34541319
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG3408] Glycogen debranching enzyme
• TIGRFAM ID: [TIGR01561] glycogen debranching enzyme, archaeal type, putative

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.304262
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGTTACC TCAAATTCGA CAAAACGCTC ATGGCGAATC TGGATGAATC GCTTCAGCGC 
GAATACATCC GCACCAATCG AAAAGGGGCT TATTCCAGCT CTACGATAGT AGGCTGCAAT 
ACCCGTAAAT ATCATGGTCT GTTGGTCGTT CCCATTCCCG AGCTGGGGGA TCAGAATCGC 
GTACTGCTGT CGTCTCTGGA TCTGACCATT ATCCAGCATG GAGCGGAGTT CAACGTAGCG 
GTTCATCACT ACAAAGGCGG AGTCATCAGT CCGAACGGTC ATAAGTATAT CCGCGAATAC 
AATGTGGATA TAATACCGGC CACCATCTTT CGCGTGGGAG GAGTGGTACT CAAGCGCGAA 
CAAGTATTCT GCCACTACAT CAATCGTGCC ATATTCAAAT ACACGCTGAT GGAAGCACAT 
AGCGATACGC TACTGCGCTT TCGTCCCCTG CTTGCTTTCA GGAGCGTGGC AGCTCTCACT 
CACGAAAACG GGCAGATCGA ACGTGGACAT ATCCCGGCCC GAAACGGCAT AGGGATCAGC 
CTCTACAAGG GTTATCCCCA TCTCTTCATG CAGTTCAGCA AAGAACCCGA ATACCGCGAG 
GAGGGATATT GGTACAAAGA CTTCGAATAC CCCAAGGAAA AAGAGCGTGG ATACGAGTGT 
ACGGAGGATC TTTACATGCC CGGCACATTC GAGATTCCCA TAAAAAAAGG AGAATCCATC 
TACTTTGCTG CCGGTCTTGA AGAGGCCAAT CCAAATACCC TCCGAACGAC ATTTGTCAAG 
GAAGTACGAG AGCGCATCCC ACGCGAAGAT TTTTTCAGCT GCCTGAGGAA TGCAGCTCAC 
CAGCTCTACT ACCGCCCTAC CCCCGACGAT GGCTACCTTC TGGCCGGCTA TCCGTGGTTC 
GACGTTCGAG CTCGCGATCT GTTCGTGGCA CTACCCGGCT GTACTCTGTG TGTAGAAGCA 
CCGGAGCGAT TCGAACGCAT CGTCAATACC GTCATTCCGG CGATGGAACG CTACATGCGA 
CTGCATGAAG ATGACGACAC CATACACGGG CTGCATGAGC CGGACGTTGG GATTTGGGCT 
ATTTGGGCCA TCCAGCAGTA TGCACGCCGC AACGGTCTGG AAGCAGCCAA GAGATTCGGC 
TCCTTCGTCA GCGAAGTGGT ATCTTATTAT CTGTCCGCCC AGCACCCGAC GGCACAAATT 
CGTGAAAATG GGCTTCTCTA CGTCTTAGGC ACAGGCTTCC CGTTAAGTTG GATGGATGCC 
AAACTGAATG GCAAAGCCGT CATCCCCCGT GAGGGCTATC TCGTCGAATT GAATGCTCTC 
TGGTACAATG CCCTCTGCTT CGAACGAGAA CTCAATGGGG AAAAACCGGA GATCGGCGAA 
ATCATCAGCC GGATCGAAAG ATCCTTCCCC GATACGTTTC TGAATTGCTA CAACTATCTC 
TTCGATTACG TTCAGGACGG CAAAGCTCAG GACTGGAGCG TACGCCCGAA CATGCTCTTC 
GCCATATCCC TCCCCTACTC CCCACTACAA CGCGATCGGC AACTGCAAGT ACTCGAGATC 
ATCACAAGAG AACTGCTGAC GCCGAAAGGG CTTCGAAGCC TAAGTCCCAA GAGCGAAGGC 
TACCGGCCTT ACTGCCGTGG CAAACAAGAA GAACGGGAAC TGGCCTACTA CAATGGTTCG 
GTATGGCCTT GGCTACTCGG ACAATACACC GAAGCCTATC TGCGTTTATA CGGGAATAGC 
GGAGTGACCT TTCTCGAAAG GATGCTTATC GGCATGGAAG AGGAACTACA GATGCACGGT 
ATCGGCACCA TCTCGGAGTT GTTCGACGGC AATCCGCCTT TCATGGGGCG CGGAGCTATC 
TCTTTTGCTA TGAGCGTAGG AGAGATATTG AGAGCCAAAG AGCTACTGAA CAGGACAGAA 
TCCGATATGC ACCTGAGTGT ACGTCATATG TACAATTATA CAAAATGGAA AGGATGA 

 

Protein sequence

MSYLKFDKTL MANLDESLQR EYIRTNRKGA YSSSTIVGCN TRKYHGLLVV PIPELGDQNR 
VLLSSLDLTI IQHGAEFNVA VHHYKGGVIS PNGHKYIREY NVDIIPATIF RVGGVVLKRE 
QVFCHYINRA IFKYTLMEAH SDTLLRFRPL LAFRSVAALT HENGQIERGH IPARNGIGIS 
LYKGYPHLFM QFSKEPEYRE EGYWYKDFEY PKEKERGYEC TEDLYMPGTF EIPIKKGESI 
YFAAGLEEAN PNTLRTTFVK EVRERIPRED FFSCLRNAAH QLYYRPTPDD GYLLAGYPWF 
DVRARDLFVA LPGCTLCVEA PERFERIVNT VIPAMERYMR LHEDDDTIHG LHEPDVGIWA 
IWAIQQYARR NGLEAAKRFG SFVSEVVSYY LSAQHPTAQI RENGLLYVLG TGFPLSWMDA 
KLNGKAVIPR EGYLVELNAL WYNALCFERE LNGEKPEIGE IISRIERSFP DTFLNCYNYL 
FDYVQDGKAQ DWSVRPNMLF AISLPYSPLQ RDRQLQVLEI ITRELLTPKG LRSLSPKSEG 
YRPYCRGKQE ERELAYYNGS VWPWLLGQYT EAYLRLYGNS GVTFLERMLI GMEEELQMHG 
IGTISELFDG NPPFMGRGAI SFAMSVGEIL RAKELLNRTE SDMHLSVRHM YNYTKWKG