Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG1664 |
Symbol | |
ID | 2552695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | + |
Start bp | 1745953 |
End bp | 1747227 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637150284 |
Product | ABC transporter, permease protein, putative |
Protein accession | NP_905784 |
Protein GI | 34541305 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.45663 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGACT TAGACAATTT GCACGAATTA GGAGCCACCC TGCGCAAGAA TATGCTGCGT ACGGCTCTCA CCGGCTTTGC CGTAGCCTGG GGTGTACTGC TGCTAATACT GCTGCTGAGT GCCGGCCGCG GATTCCAGCA TGGCATCCGG CACAATGTGG AGCAGTTCGG TATGGGTACG AGTGCGATCA GCTTCTCCAC ATGGCGTACC AGCAAGGAGT ACGGAGGCTA TCCCAAGGAC AGATACATAG AGCTGACACC TGCTGACTGC GACTATCTGG TCAAGCTCAA TCCCGATCTG ATCAAAGGTG CGGCATACTA TACCAACCAG TGGAGCTACG ACGTACAGTA CGAAGATCGG ACACACTCGA CTCCTACGAA AGCCGTATCC GGAGAATACG GCAATATGGT CAAGACGCAT CTGATCGAAG GACGTTTCCT CTCCACATCA GACGATGCCA TGAAGAGAAA AGTAATAGTC CTATGTGAGC AGACGGCTGA TGTCTTATTC GGGGAAAGCA TTTCGCCCAT AGGGAAATAC GTAAATCTGT CCCAAATCCC GTTCCTCGTC GTAGGCGTTT GCAAAGGCGA ACAGGGGCAA TTCAGCCCCA ACTATATTCC TTTCGCCACC TATTCAGGTA TTTTCGCCAA AGGGTTCAGT CTGGACTGCA CACTGTTCAT GAACTGCCCG TCTGTGCGAA CTGAGGAGAA CGTGGAGAGA CTCAAAGTAC TACTCAATCG CCAACTGGCC TTCCGCAAGG GCTATGATCC TACCGATATG GAAGTGCCCT ATGTCGATGC ACCGGTGACG GACATAAAAA TGATGGACAA GATATTCAAT GGCATGGATG TTTTTCTTTG GATTATCGGG TTGAGCACCC TTGTCATCGG AATTATCGGA GTGGCCAATA TCATGCAAGT GACCGTCAAT GAAAGACAGC GCGAAATAGG CATTCGCAAA GCACTGGGAG CCAAGCCAAG AGCTATCATC AACATGATTC TGACAGAGGC GGTAGTGGTC ACACTGTTTT CCGGACTGAT AGGCTTGGTG GCCGGCGTTG GTCTGATGGA GTTCGTATCG CATTGGGTAC AGACCACCGG TGTCGGGAGC AGACAGGTAG AAGGAATAAC GCTGACACTC TTCCGCGATC CGAGCATCGA CCTGAGCACT GCCCTATTAG CTCTGATAGT CATGGTAGTA AGCGGTGCCA TAGCAGGATA CCAACCCGCC CGCAAAGCCG TACGAATCCC CGCGGTGGAG GCGATGAGAA ACTAA
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Protein sequence | MFDLDNLHEL GATLRKNMLR TALTGFAVAW GVLLLILLLS AGRGFQHGIR HNVEQFGMGT SAISFSTWRT SKEYGGYPKD RYIELTPADC DYLVKLNPDL IKGAAYYTNQ WSYDVQYEDR THSTPTKAVS GEYGNMVKTH LIEGRFLSTS DDAMKRKVIV LCEQTADVLF GESISPIGKY VNLSQIPFLV VGVCKGEQGQ FSPNYIPFAT YSGIFAKGFS LDCTLFMNCP SVRTEENVER LKVLLNRQLA FRKGYDPTDM EVPYVDAPVT DIKMMDKIFN GMDVFLWIIG LSTLVIGIIG VANIMQVTVN ERQREIGIRK ALGAKPRAII NMILTEAVVV TLFSGLIGLV AGVGLMEFVS HWVQTTGVGS RQVEGITLTL FRDPSIDLST ALLALIVMVV SGAIAGYQPA RKAVRIPAVE AMRN
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