Gene PG1365 details

Gene Information

• Locus tag: PG1365
• Symbol: rimM
• ID: 2551649
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: -
• Start bp: 1445632
• End bp: 1446159
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637150027
• Product: 16S rRNA-processing protein RimM
• Protein accession: NP_905530
• Protein GI: 34541051
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 19
• Fosmid unclonability p-value: 0.887328
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATCGATT TGGATTCATT GGAGCATATC GGTGTGCTGG GTAAGCCGCA TGGCGTTCAG 
GGAGAGTGCA ACGCTCGTCT GACAGCCGAT TTGAGTACGC TCTTTGAGGA AGAAGAGCGG 
TTGTTTCTCT TTTTCGAGCT GGATGCATTG CCGGTTCCGT TCCGTCTTAT TGGCTACCGT 
GAGAAAACCG ATGATATTAC TTTGCTCCGC TTTGCCGGTA TTGAAAGCAA GGAGGAGATG 
GAGCAGTACA CCGGTGTGTC TCTCTTTATG GAACGACGAT ACTTCGATAC TGATTCTATC 
GAATTCACCT GGGAACATTT CATCGGCTTT ACGGTATTCG ACCGAGAAGG TTGTTTCGTA 
GGGACAATCG ATGATGTGGA CGAGAGTACG CTCAATGTCC TTTTGTCTAT AACTACGCCC 
GAAGGAAAAG AACTCCTTTT ACCCGTAGCT GAGGATTTGC TGGAAGAGAT AGATGTGCCA 
AATCGGAAAC TAACGATGAT TATTCCCGAC GGCCTACTGC AATTATGA 

 

Protein sequence

MIDLDSLEHI GVLGKPHGVQ GECNARLTAD LSTLFEEEER LFLFFELDAL PVPFRLIGYR 
EKTDDITLLR FAGIESKEEM EQYTGVSLFM ERRYFDTDSI EFTWEHFIGF TVFDREGCFV 
GTIDDVDEST LNVLLSITTP EGKELLLPVA EDLLEEIDVP NRKLTMIIPD GLLQL