Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG1036 |
Symbol | uvrA-1 |
ID | 2553083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | + |
Start bp | 1098576 |
End bp | 1101479 |
Gene Length | 2904 bp |
Protein Length | 967 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637149741 |
Product | excinuclease ABC, A subunit |
Protein accession | NP_905256 |
Protein GI | 34540777 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0178] Excinuclease ATPase subunit |
TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000000712855 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCACGATA CAGTTATAAA CGTAAAAGAC AAGATAGCTC GACACGATGC TGTCGAAGTC TATGGAGCAC GGGTGCACAA TCTGAAGAAT ATCGATGTGT GCATTCCGCG TCATAGCCTT ACAGTCATCA CTGGAATGAG TGGTAGCGGA AAGTCGTCAT TGGCTTTCGA TACCCTTTTT GCCGAAGGAC AGCGACGGTA CATAGAAACT TTTTCGGCTT ATGCGCGGAA TTTCCTCGGT GGTGGTATGG AGCGCCCCGA CGTGGACGAG ATAAAAGGGC TGAGTCCGGT CATTTCCATA GAACAGAAGA CGACCAATCG GAATCCGAGA TCGACTGTCG GTACCGTTAC AGAGGTGTAC GACTTCTTTC GTTTGCTCTA TGCTCGTGTT GCTGAGGCTT ATTCTTATGC CGGAGGAAAG AAGATGGTGA AATACACCGA GGAGCAAATC TTCCACCTCA TTTTGGAAAA GTATGATGGC CGTAAGATAG CTTTGTTAGC CCCGGTGGTT CGCTCGCGTA AGGGGCATTA TAAGGAGCTA TTCGAAAGGC TTCGTAAGAA AGGCTATCTG CACGTACGCG TGGATGGTGA GATTCGCGAG ATTTTGCATG GGATGAAGCT TGATCGCTAT AAAATGCATG ACGTCGAAGT GCAGATCGAC AAGCTGTGCG TAGCATCGAA TCAAAGCAAA CGTATAGCGG AGAGCTTGGC ACTGGCTATG CGTGAAGGCG AAGGGCTTGT GATGGTGTTG GATTCGGAAA AAAACGAAGT GGGACATTTT AGTCGGATGA TGATGTGTCC TGATACGGGA ATTTCGTATA GCGATCCGGC TCCGCACAAT TTCAGTTTCA ATTCCCCTCA TGGCTATTGT CCGCGCTGTA AGGGCTTGGG CGAAGTGAAT CTGCCGGATA TGGACAAGAT CATTCCATCT CGTGAGAAGA GTATATACGA AGGTGGCATT GAGCCATTGG GCAAATACAA AAACAATCTT TTCTTTTGGC AAATAGAGGC ATTGTGCGAG AAGTACGATG TGACGATCAA AACGCCTTTG CGCGATTTGC CGGAAGAGTT GATCGAGGAT ATCCTATATG GTACAGACGA ACTACTGACC ATAAACAACA AAGCTTTGGG GCAGTCGAGG TATGCTCTCA GCTTCGATGG CGTGGCTAAG TATATATTGA TGCAGGCAGA AGAATCGGAT GCTTCGGCTA CTGCGCAGAA ATGGGCAGAT CAGTTTCTCA AGACTACAAC TTGCCCCGAC TGTGCCGGCA AGCGTCTGAA CAAAGAAGCT CTGTCCTATC GTTTGGCCGG CAAGGACATT GCAGAAGTGA ATGCAATGGA CATCAAGACT CTTATTGAAT GGGTAGATTC TCTGGATGAA CATCTGTTGG ATACGCAACG GGCTATTTCT ATAGAAATAC TGAAAGAGAT ACGGACACGC TTGGGGTTTC TTAAAGATGT GGGGTTGGAG TACTTGACGA TGAACCGAGC TGCAGCATCC TTATCCGGAG GAGAAAGCCA GCGTATTCGT TTGGCTACGC AGATCGGGAG CAAACTGGTT GAGGTCTTGT ACATATTGGA TGAACCGAGT ATCGGTCTTC ACCAAAGGGA CAATCTTCGG TTGATTCATT CGCTTCAGGA TTTGCGTGAT ATAGGCAATA CAGTGGTAGT GGTGGAGCAT GATCAGGATA TGATGCTGCA CGCCGACTAT GTAATAGACT TAGGACCACG AGCCGGCAGA CATGGTGGTG AAGTGGTGTT TGCAGGTAGT CCGGAAGAGA TGGTGCAGGC TAATACCCTG ACTGCCGATT ATATAAGTGG ACGAAAGCGT ATAGAAAAGT CGATCGGCAG GAGAGATGGT AGTGGGAAAA CGATAAAATT ATTTGGAGCC AAAGGCAATA ACCTGCAGAA TATAGACGTT ATCTTTCCGC TGGGGGTATT TATATGTGTT ACCGGGGTCT CCGGTAGTGG GAAAAGTACA TTGATCAATA AGACTCTATT CCCTGCTATC AGCCAAAAGC TGTACCGCTC TTTGCAGGAT CCGATGCCCT ACGACCGCAT AGAGGGGTTA AAGCATATAG ATAAGATAAT AGCCGTAGAC CAAAGTCCTA TCGGGCGGAC GCTTAGAAGC AATGCAGCCA CATATACGGG ATTGTTTACC GATATTCGCG CTCTTTTTGT CGGTCTGCCC GAGAGTAAAG CTCGTGGATA TAAGCCGGGG CGTTTTTCTT TCAACGTCAA AGGCGGACGC TGTGAGGTTT GTAAGGGTAA TGGCTACAAG ACGATCGAAA TGAATTTTTT GCCCGATGTA TTTGCTCCGT GTGAGGGATG CCGGGGAAAG CGATACAACA GGGAGACACT CGAAGTCCGT TACAAAGGAA AATCCATTGC GGATGTTTTG GATATGACTA TCAATAAGGC TGTCGAATTT TTCGAACATG CACCTCATAT TTTATCCAAG CTTTCCGTTT TACAGGAGGT CGGTTTGGGC TATATCAAAC TGGGACAACC ATCCTCGACT TTGTCGGGAG GAGAGTGTCA ACGTGTTAAA TTAGCCACCG AGCTGAGTAA ACGTGACACG GGAAATACAC TCTATGTATT AGATGAACCG ACTACGGGCT TACATTTCGA AGATGTACGC GTTTTGTTGG GGATCCTTAA TCGACTGATA GAGAGAGGGA ATACGGTAAT AGTGATCGAA CATAATTTGG ATGTGATCCG CTGTGCGGAT TATTTGATTG ATATAGGACC GGAGGGAGGA GCAGGTGGCG GACAGTTGCT TTACCAAGGG AAAATGGAGG ATATAATAGA ATGCAAGAAT AGTTATACAG CTCAATTTGT GAAAGCCGAA CTCGAAAAAG GCCGGATTGA TACTGTACAC ATGAATTCTG CAGACAATAT ATAA
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Protein sequence | MHDTVINVKD KIARHDAVEV YGARVHNLKN IDVCIPRHSL TVITGMSGSG KSSLAFDTLF AEGQRRYIET FSAYARNFLG GGMERPDVDE IKGLSPVISI EQKTTNRNPR STVGTVTEVY DFFRLLYARV AEAYSYAGGK KMVKYTEEQI FHLILEKYDG RKIALLAPVV RSRKGHYKEL FERLRKKGYL HVRVDGEIRE ILHGMKLDRY KMHDVEVQID KLCVASNQSK RIAESLALAM REGEGLVMVL DSEKNEVGHF SRMMMCPDTG ISYSDPAPHN FSFNSPHGYC PRCKGLGEVN LPDMDKIIPS REKSIYEGGI EPLGKYKNNL FFWQIEALCE KYDVTIKTPL RDLPEELIED ILYGTDELLT INNKALGQSR YALSFDGVAK YILMQAEESD ASATAQKWAD QFLKTTTCPD CAGKRLNKEA LSYRLAGKDI AEVNAMDIKT LIEWVDSLDE HLLDTQRAIS IEILKEIRTR LGFLKDVGLE YLTMNRAAAS LSGGESQRIR LATQIGSKLV EVLYILDEPS IGLHQRDNLR LIHSLQDLRD IGNTVVVVEH DQDMMLHADY VIDLGPRAGR HGGEVVFAGS PEEMVQANTL TADYISGRKR IEKSIGRRDG SGKTIKLFGA KGNNLQNIDV IFPLGVFICV TGVSGSGKST LINKTLFPAI SQKLYRSLQD PMPYDRIEGL KHIDKIIAVD QSPIGRTLRS NAATYTGLFT DIRALFVGLP ESKARGYKPG RFSFNVKGGR CEVCKGNGYK TIEMNFLPDV FAPCEGCRGK RYNRETLEVR YKGKSIADVL DMTINKAVEF FEHAPHILSK LSVLQEVGLG YIKLGQPSST LSGGECQRVK LATELSKRDT GNTLYVLDEP TTGLHFEDVR VLLGILNRLI ERGNTVIVIE HNLDVIRCAD YLIDIGPEGG AGGGQLLYQG KMEDIIECKN SYTAQFVKAE LEKGRIDTVH MNSADNI
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