| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1028 |
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| Symbol | |
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| ID | 2553067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | + |
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| Start bp | 1089810 |
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| End bp | 1091156 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637149733 |
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| Product | TPR domain-containing protein |
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| Protein accession | NP_905248 |
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| Protein GI | 34540769 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000992494 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACAAGA GTGAACTCTT CTTAACCTTC GAAGCCAAAG TAAAAGGGAA GAAAATAAAT
CTTCCGGATC TCAAAATCGC TGATGGTGTA ATCAGTACGG AAGCCTTGGC TTCTGCTCTT
AATGCATCGG CGGCAATCGC TCCGGATGCA TTCCAGCGCA TCATCAAGCA AGCCTATGAT
GCAAATATCA TGTTCCTCAT CCAACAGGCA CAGATTCGTG CACAAGAAAT CAACAAGGGT
GAGGTGAAAG ACTGGAAAGA CTTGGTGGCC AATGCCAAGG ATGCTCCCAA TCAGGATGTA
ACGGTGGAGG TACAAGCCTA CGCTTCTCCT GATGGCGGTG TGGAGCTGAA CGAAAAGCTG
TCCGAGCAGC GCGAGAAAAA TACGACTACT GCTCTGAAGA AACAATTCCA AAAGAGCAAT
ATCAAGGATG TAGAGATCAA TGCACACTAT ACGGCACAGG ACTGGGAAGG CTTCAAGCAG
CTTGTGGAGA AAAGCGATAT TCAGGACAAG GAACTTGTTC TGCGTGTTCT CTCCATGTAT
CCGGATCCCG AGCAGCGTGA GCAGGAGATC AAGAATATCT CTACCGTATT CAGACAGCTG
GCGGATGATA TCCTGCCCCA ATTGCGTCGT TCGCGCCTTA TCGCCAATGT CGAAATCATA
GGTAAGAGCG ATGACGAGAT CAAACGTCTT GCAGCCCAGA ACCCCGGCCG GCTGACCGTG
GAGGAGCTGC TCTATAGTGC TACTCTGCTC GAATCTCCTG CTCAAAAGGA AGATATTTAC
AAGGTGGCTA CTCAGATCTA TCCGGATGAC TATCGTGCTT ATAACAATAT CGGTATGATG
CGTTATCGCA GCGGTGATTT GGAGGGTGCT CGTACTTGGT TCCAAAAGGC TGCAAGCGTG
AAGCCCAATG CAGAAACGGA TATGAACCTT GGACTATTGG CTCTTAACGA GGGTAATGTA
GAGCAGGCTA AGCAGTATTT CGGCTCGGCT GCCAATGTGC CCGAATTGGG CGAAGCTCTT
GGTTTGCTCT ATCTGCAAGA GGGCAATTAT GCCCAGGCTG TAGCGGCTTT CGGTAAGACC
GAGAGCAACA ATGCTGCCGT GGCCAATATC CTCAATCGCG ACTACAACCG AGCACAAGAG
ATCCTGAATG GGATAAAGAA TCCCGATGCT ACTACTTATT ACCTCATGGC TGTTGTGGCT
GCACGTACGA ACAACTTGGA CGTTGTAATA AATTCGCTCC GTGAATCCAT CAGTCTCGAT
AGCAGTATGA TGAAGAAAGC CGCTACGGAT CTGGAGTTCG CCAAGTATGC AAACGACGGA
GGTTTCAAGT CATTGCTCCG CCACTAA
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| Protein sequence | MDKSELFLTF EAKVKGKKIN LPDLKIADGV ISTEALASAL NASAAIAPDA FQRIIKQAYD
ANIMFLIQQA QIRAQEINKG EVKDWKDLVA NAKDAPNQDV TVEVQAYASP DGGVELNEKL
SEQREKNTTT ALKKQFQKSN IKDVEINAHY TAQDWEGFKQ LVEKSDIQDK ELVLRVLSMY
PDPEQREQEI KNISTVFRQL ADDILPQLRR SRLIANVEII GKSDDEIKRL AAQNPGRLTV
EELLYSATLL ESPAQKEDIY KVATQIYPDD YRAYNNIGMM RYRSGDLEGA RTWFQKAASV
KPNAETDMNL GLLALNEGNV EQAKQYFGSA ANVPELGEAL GLLYLQEGNY AQAVAAFGKT
ESNNAAVANI LNRDYNRAQE ILNGIKNPDA TTYYLMAVVA ARTNNLDVVI NSLRESISLD
SSMMKKAATD LEFAKYANDG GFKSLLRH
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