Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG0630 |
Symbol | pdxJ |
ID | 2552514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | + |
Start bp | 683532 |
End bp | 684248 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637149390 |
Product | pyridoxine 5'-phosphate synthase |
Protein accession | NP_904915 |
Protein GI | 34540436 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0854] Pyridoxal phosphate biosynthesis protein |
TIGRFAM ID | [TIGR00559] pyridoxine 5'-phosphate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.377308 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAAGGC TAAGCGTAAA CGTAAATAAG ATAGCTACCC TCCGCAATGC ACGCGGAGGC AATGTCCCCG ATGTCCTCCG AGTGGCTCTC GACTGTGAGC GGTTCGGTGC ACAGGGGATT ACCGTCCATC CGCGTCCCGA CGAACGCCAT ATCCGTCGGT CGGATGTGTA CGACCTCAAA AAGGCACTGA CCACAGAGTT CAACATAGAG GGCAATCCCG ACGAGCGTTT CATCCGTCTG ATCGAGGAAA TCCGTCCCGA GCAGGTGACC ATGGTACCCG ATGCTCCCGA TGTCCTGACC TCCAATGCCG GATGGGATGT GGCCCGAAAC TACGACCATC TCTGCCGTCT GGTGGAGCGG TTCCATGCCT GGGGTATCAG GACTTCCATA TTCATCGATA CCGACTTGGA CAATATCTCG TGGGCTGCCA AGACAGGTAC AGACCGGATA GAGCTTTACA CCGAGCCGTA TGCAGCCGCC TATCATAAGG ACATGGCTGC TGCCGTACAG CCCTATGTCA AGGCTTCGGT ACACGCTCAT TCGCTCGGTC TCGGTATCAA TGCCGGACAC GATTTGAATC TGGACAACCT CCGTTACTTT GCCGAACGAC TGCCCTATTT GGACGAAGTT TCCATCGGCC ACGCACTGAT TGCCGATGCT CTCTATTTGG GACTGGAGGA GACTATCAGA CAATATCGAG ACCAACTTGC GTTATAA
|
Protein sequence | MTRLSVNVNK IATLRNARGG NVPDVLRVAL DCERFGAQGI TVHPRPDERH IRRSDVYDLK KALTTEFNIE GNPDERFIRL IEEIRPEQVT MVPDAPDVLT SNAGWDVARN YDHLCRLVER FHAWGIRTSI FIDTDLDNIS WAAKTGTDRI ELYTEPYAAA YHKDMAAAVQ PYVKASVHAH SLGLGINAGH DLNLDNLRYF AERLPYLDEV SIGHALIADA LYLGLEETIR QYRDQLAL
|
| |