| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG0477 |
|---|
| Symbol | panC |
|---|
| ID | 2551844 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | - |
|---|
| Start bp | 518842 |
|---|
| End bp | 519687 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637149243 |
|---|
| Product | pantoate--beta-alanine ligase |
|---|
| Protein accession | NP_904773 |
|---|
| Protein GI | 34540294 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0414] Panthothenate synthetase |
|---|
| TIGRFAM ID | [TIGR00018] pantoate--beta-alanine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATAT TCAACACCGT CGCTTCACTC AAGAACTTTG TGGCACATGC TCGTGCCGAA
GGGAAAACCA TCGGCCTCGT CCCCACGATG GGAGCTTTGC ACCGAGGACA CATCAGTCTG
ATCCACCGTG CCGTAGCCGA ATGCGACATT TGCGTGGCAA GCGTATTTGT CAATCCTACA
CAATTCAACG ACAAACGCGA TCTGGAATGT TATCCCCGCA CACCGGAAGC CGATGCAGCA
GTCTTGGCGG AAGCCGCTTG TCATGCCGTA TTCATGCCCT CCGTAGAAGA GGTATATCCC
GAACCGGACA CTCGCGTATT CGATCTGGGC AGTGTGGCGG AAGTGATGGA AGGCAAGCAT
CGCCCCGGAC ACTTCAATGG CGTGGCGCAG GTGGTAAGCA AACTCTTCAT GATGGTGGAG
CCGGACAAGG CATATTTCGG AGAAAAGGAT TTCCAGCAAA TCGCCGTTAT CCGCAGCATG
GTGAACCTGC TTGGCTTACC CGTTACGATC GTGGCCTGTC CTATCATCCG TGAAGAGGAC
GGGCTTGCAC TCAGTAGCCG CAACGTCCGC CTCGGCACCG AAGAGCGTGC CATAGCCCCA
TCCATCGCTC GCATCCTCGG ACAAAGCCGC ACACTCCGTC CGGCACATAC ACCCGAAGCT
GTTACGCGAT GGGTGACGGA AAGCCTTAAT GCCCTGCCTC ATCTGCAAGT GGAGTACTTC
GAAATAGTAG ACGGGAATTC CTTACAAAAG ATCGACAACT GGCAAGACAC CGACCATGCC
GTAGGTTGTA TTACGGTATA TTGCGGAGAG GTTCGCCTGA TCGATAACAT CAAATATGAA
GATTAG
|
|---|
| Protein sequence | MEIFNTVASL KNFVAHARAE GKTIGLVPTM GALHRGHISL IHRAVAECDI CVASVFVNPT
QFNDKRDLEC YPRTPEADAA VLAEAACHAV FMPSVEEVYP EPDTRVFDLG SVAEVMEGKH
RPGHFNGVAQ VVSKLFMMVE PDKAYFGEKD FQQIAVIRSM VNLLGLPVTI VACPIIREED
GLALSSRNVR LGTEERAIAP SIARILGQSR TLRPAHTPEA VTRWVTESLN ALPHLQVEYF
EIVDGNSLQK IDNWQDTDHA VGCITVYCGE VRLIDNIKYE D
|
|---|
| |