Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG0152 |
Symbol | nspC |
ID | 2552247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | - |
Start bp | 174611 |
End bp | 175747 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637148961 |
Product | carboxynorspermidine decarboxylase |
Protein accession | NP_904494 |
Protein GI | 34540015 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01047] carboxynorspermidine decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAT ACCACGACAT AGCATCTCCG GCCTACATAC TGGAAGAAGA TCTGCTAAGG CGCAATCTAT CCCTGATTGC GTCCGTAGCC GACCGTACCG GCGTGGAGAT CATCCTCGCT TTCAAGGCCT ATGCCCTCTG GCGTACCTTC CCGATCATCA GGGAATACGT ACCCCACAGT ACGGCCAGCT CTGTATGGGA AGCCCGCCTT GCCTTCGAAG AGATGGGGGC ACCGGCTCAT ACATTCAGTC CGGCTTATAC GCCGGAGGAG TTTCCGGAGA TACTGCGTTA TAGCAGTCAC GTCACATTCA ACTCTCTCAG CCAGTACTAC CTGCTTTCGC CCATGGTGAA GAACGTAGGC GTATCGCTCG GACTCAGAAT CAACCCCGAA TACTCGGCCG TGGAGACCGC GCTCTACAAT CCTTGTGCAC CGGGTTCGCG ATTCGGTGTA TCGGCTTCCG AATTGGGCGA CACCCTGCCG GAGGGTATCG AGGGTCTGCA CTTCCATACG CTTTGCGAGA GCACCGGCTA CGAACTGGAG AAGACCCTCA AGATCATTGA GGATCGCTTC GCTTCCGTGC TGGAGCAAGC GCATTGGCTC AATATGGGCG GCGGCCACCT GATGACCCGT CGGGACTATG ACGTGGAGCA CCTTGTGCAG GTGCTGAACG ACTTCTCCCG CCGCCATCCC CATCTGCATC TTATCATGGA GCCGGGCAGT GCTTTCGGCT GGCAGACGGG GTTTCTCAAG AGCACGGTGG TGGACATCGT AGAGCATCAA GGCATTGCCA CTGCTATCGT GGATGTGTCC TTCACCTGCC ACATGCCGGA CTGTCTGGAG ATGCCTTACA AACCCGTCAT TCGTGGAGCG CATCAGGAGC CGGTACCCGG CCTGCCCACA TACAGGATAG GCGGATGCAG CTGTCTGAGC GGCGACTTCA TCGGTGACTG GAGTTTCGAT CGGCCGTTGC AGGTGGGCGA TGAACTGATA TTCGAGGACA TGCTCCACTA CACGACGGTG AAGACGACCA TGTTCAACGG TGCACGCCAT CCGGACATCG TACTGCTGCG CACCGACGGG AAGAAAGAGG TGTTGCGCCG GTTCGATTAT GAGGATTACA AGAACAGAAT GAACTAA
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Protein sequence | MAKYHDIASP AYILEEDLLR RNLSLIASVA DRTGVEIILA FKAYALWRTF PIIREYVPHS TASSVWEARL AFEEMGAPAH TFSPAYTPEE FPEILRYSSH VTFNSLSQYY LLSPMVKNVG VSLGLRINPE YSAVETALYN PCAPGSRFGV SASELGDTLP EGIEGLHFHT LCESTGYELE KTLKIIEDRF ASVLEQAHWL NMGGGHLMTR RDYDVEHLVQ VLNDFSRRHP HLHLIMEPGS AFGWQTGFLK STVVDIVEHQ GIATAIVDVS FTCHMPDCLE MPYKPVIRGA HQEPVPGLPT YRIGGCSCLS GDFIGDWSFD RPLQVGDELI FEDMLHYTTV KTTMFNGARH PDIVLLRTDG KKEVLRRFDY EDYKNRMN
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