Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG0021 |
Symbol | |
ID | 2551464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | - |
Start bp | 24212 |
End bp | 25213 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637148839 |
Product | NifR3 family TIM-barrel protein |
Protein accession | NP_904378 |
Protein GI | 34539899 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATAG GTGCCATAGA CCTCGGGGTA GAGCCTTTGC TACTCGCTCC GATGGAGGAT GTGACGGATG TAGCCTTCCG GATCATGTGC AAGCAGTTCG GTGCCGATCT GGTTTATTCC GAATTTCTCA GTGCCGATGC CCTGATTCGT CAAGTAGCCG GCACATTCCG AAAAATGGCC ATAGATGAAT CGGAACGCCC GATGGCTGTA CAGATATACG GACGGGATGT GGCTTCGATG GTAGAGGCTG CCCGACTATG CGAATCGGCC GGTCCGAATC TGATCGATCT GAACTTCGGA TGTCCGGTCA AACGGGTAGC AGGGAAAGGT GCCGGCAGCG GAATGCTCCG CAATATCCCA CTTATGATAG AGATAACGCG TGAGGTAGTC AAGGCGGTGA AGTTGCCGGT AACGGTGAAA ACGCGGCTTG GCTGGGACAA TGACAGCAAG ATCATAGTAG ACCTGGCCGA ACAGCTCCAA GACTGTGGCA TTGCAGCCCT GACCATACAT GGTCGTACAC GCGCCCAAAT GTACACGGGG ACGGCTGACT GGACGCTGAT CGGAGAAGTG AAGAACAATC CGAGAATGCA AATCCCCATT ATCGGAAACG GAGACGTGAC CACTCCGCAA GAAGCCCGAC GAGCCTTTGA CGTATATGGC GTGGATGCCG TAATGGTAGG CAGGGCTTCT ATCGGACAAC CATGGATATT CGAGGATATG AAGCATTTCC TTCGTACGGG AGAAACGTTG CCTTCGCGTC CGTTTTCCTA TTATATGGAC ATACTCCGCC GTCAGACGTT GAACAACATC CGAAAACTGG ACGAACGGCG AGGTATCCTC CATACACGCA GACATATTGC AGCCAGCCCC ATATTCAAAG GGATTCCAAA CTTCAAACCC ATGCGCGTGG CCATGCTTCG TGCCACGACA CAGGAGGAGC TTTTCGCTCT TATGGACGAG GTGGAGAAGA TGATAGGATC GGCTGATTCA GCGGCGGTAT AG
|
Protein sequence | MKIGAIDLGV EPLLLAPMED VTDVAFRIMC KQFGADLVYS EFLSADALIR QVAGTFRKMA IDESERPMAV QIYGRDVASM VEAARLCESA GPNLIDLNFG CPVKRVAGKG AGSGMLRNIP LMIEITREVV KAVKLPVTVK TRLGWDNDSK IIVDLAEQLQ DCGIAALTIH GRTRAQMYTG TADWTLIGEV KNNPRMQIPI IGNGDVTTPQ EARRAFDVYG VDAVMVGRAS IGQPWIFEDM KHFLRTGETL PSRPFSYYMD ILRRQTLNNI RKLDERRGIL HTRRHIAASP IFKGIPNFKP MRVAMLRATT QEELFALMDE VEKMIGSADS AAV
|
| |