| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_4550 |
|---|
| Symbol | |
|---|
| ID | 7095929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8801 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011723 |
|---|
| Strand | + |
|---|
| Start bp | 36115 |
|---|
| End bp | 37203 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643467530 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_002364826 |
|---|
| Protein GI | 218203973 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 85 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 0.798479 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCACCA ATGCCACCCC TTCCCCTCTC AGTGAGGCTG ACTTATTAGC TCGCTTTGCC
CAGTTTGTCC GTCTCGATAC CGCCGATGGC AATGCTTCTG ACGATACGGT GAAAACCTAC
GCCTGTACGG TTAAGCAATT TCTCGGTTGG TGCGACGCGC AACGGCTTCA TCCTCTCGAT
GCGACGCGAG ATGACCTCAA ATCCTATCGG CGTTGGTTAG TGGACGGTCA ACAATACAAA
TGTGCCACCA TCGCCTTGAA ATTGACGGTG GTGCGTCGTT TTTATGCAGG GGCGGTGGAA
CGGGGGCTGA TTCTGGCTAA TCCGGCTTTG GGCATTAAAC CCCCCAGGGA AACCATCGAT
CCGGCTGAGC GCATTAATTA CCTCGAAGAA GCCGAAGTAA CGCGGTTATT GGAGAGTTTG
CCCACTGAGA ATACGGTGGG GGCGTTGCGG GATAGGTTTC TGGTGGCCGT CATGGTTTTG
GAGGGATGCA GAACCGTGGA AATGCACCGC GCTTCTATTG GGGATATTGT AAAACGAGGT
GGTGATATCG GCATTCGGGT ATCAGGAAAA CGATCTCGAC GCATTGTGCC GTTAACGCCT
GATTTAGCCA AGCTGCTGAA TAAGTATCTG AATGCTAGGA AGCGGTCAGG GGAGGCATTG
TTAGCGGATA CTCCTTTGTT TATTGCGTTA GATAAAAGGA CGTATGGAGG GCGATTAAGT
CGTCGTTCGA TTCAGCGAGT AATTGATAAG TATTTACAGG CATCAGGGTT GAAAGAGCAG
CCGACAAAAC AAAAAAGCCC AAAACGGGCA TCTAATCAGT CTCATCAACC GTCTAGCGGG
GAGAAACAAC GCTCTTCACA ATCTGCTTCA TCTACGTCTA CTAAGTTTCA ACAACCAGAG
CGACAGTTGA GCGCACATTC TTTGAGGCAT ACGGCAGGGA CATTGGCCAT CAGGGCAGGT
TCGGATTTAA GGCAGGTGCA GGATTTGTTA GGCCATGCTG ATCCCAGGAC GACTGCTTTG
TATGCTCATG TGGCTGATCG GTGGCGCAAT AATCCAGCCT TGAGGTTGGG GGTCAAGGTT
CCGCTTTGA
|
|---|
| Protein sequence | MLTNATPSPL SEADLLARFA QFVRLDTADG NASDDTVKTY ACTVKQFLGW CDAQRLHPLD
ATRDDLKSYR RWLVDGQQYK CATIALKLTV VRRFYAGAVE RGLILANPAL GIKPPRETID
PAERINYLEE AEVTRLLESL PTENTVGALR DRFLVAVMVL EGCRTVEMHR ASIGDIVKRG
GDIGIRVSGK RSRRIVPLTP DLAKLLNKYL NARKRSGEAL LADTPLFIAL DKRTYGGRLS
RRSIQRVIDK YLQASGLKEQ PTKQKSPKRA SNQSHQPSSG EKQRSSQSAS STSTKFQQPE
RQLSAHSLRH TAGTLAIRAG SDLRQVQDLL GHADPRTTAL YAHVADRWRN NPALRLGVKV
PL
|
|---|
| |