Gene PCC8801_1452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_1452 
SymbolnusB 
ID7105299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand- 
Start bp1525473 
End bp1526108 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content40% 
IMG OID643474528 
Producttranscription antitermination protein NusB 
Protein accessionYP_002371665 
Protein GI218246294 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCCTC GTCAACAACC TCGTCGAATT TCCCGTGAAT TAGCTTTATT AAGTCTGAGT 
CAAATTAACG CAACTCCTGA AAAACTCGAA CAGATTGAGA TCAATAATCT GATTTTAGCT 
GCCATTCGGA CGCTAACTAC CGAAAGCCAA GATATGTTAG AAACAGCAGC TTCTGAGGTG 
ACACAGGGTA ATGAAAGACT CTTGAAAAGT GAAACCCAGT CTGCTAATGT TCAAAGTGCT 
AGAGCGATGG TTTCTGAAGC TCTCAAACTG ACTCAAGGAG CCATTAATCG CTTAGCTCAT 
GCGATAGAAT TACCAGAAAT GATTCAGCTT GCCAGTCAGT ATGAGGTGCG AGAATATGCT 
TTAGAATTGA TTGGTGCAGT TAATCGCCGA CGAACGGAAA TTGATCAGCA GCTTGAGGCA 
GTTTTGGTGG ATTGGCAATT AAATCGATTA CCCAAAATTG ATCGAGATAT TTTACGCATA 
GCCGTCGCAG AAATTTTGTT TTTAGAAATT CCTAATAAAG TGGCAATTAA TGAAGCTATA 
GAAATGGCTA AGCGATATTC TGATGATGAG GGTTATCGTT TTATTAATGG GGTTCTTCGA 
CGCTTTACAG AACGCCTTAG AATAACTAAT AATTAG
 
Protein sequence
MPPRQQPRRI SRELALLSLS QINATPEKLE QIEINNLILA AIRTLTTESQ DMLETAASEV 
TQGNERLLKS ETQSANVQSA RAMVSEALKL TQGAINRLAH AIELPEMIQL ASQYEVREYA 
LELIGAVNRR RTEIDQQLEA VLVDWQLNRL PKIDRDILRI AVAEILFLEI PNKVAINEAI 
EMAKRYSDDE GYRFINGVLR RFTERLRITN N