Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC8801_1288 |
Symbol | |
ID | 7105056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8801 |
Kingdom | Bacteria |
Replicon accession | NC_011726 |
Strand | - |
Start bp | 1339647 |
End bp | 1340573 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643474372 |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_002371509 |
Protein GI | 218246138 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGGAT TTATTGCCTT AAATAAGCCA TCAGGGATGA CTTCCCATGA TTGCGTGGCT AGAGTGAGAA AGATTATTAA ACAGAAAAAA GTTGGTCACG GGGGAACGTT AGACCCTGCG GCAACCGGAG TTTTACCGAT CGCGGTGGGA CAAGCAACCC GTCTTTTAGC CTTTTTGCCC GAAAATAAAG CCTACCGCGC TAAAATTCGC CTAGGAGTCC AAACTGCTAC CGACGATCTC GAAGGAGAGG TAATTCGGAC TCAAACTGCA CCTAATTTAA CGTTAGAACA GGTTGAACCC TTATTAAGTC AGTTTCTCGG AAGCATTCAA CAAATTCCGC CGATGTATAG TGCTATTCAA AAGGATGGTA AGCGGTTGTA TGAGTTGGCC AGACAAGGAG AAACGCCAGA GGTTCCAAGT AGAGAGGTTA GAATAGATGA TATTAAGGTA ATTAACTGGT ATTCTAGCAA ATTTCCTGAA TTAGAGCTAG ATATTGCCTG TGGTGCAGGG ACTTATATTC GAGCGATCGC CCGTGATTTA GGTGCTATGC TCAATATCGG GGGGACTTTG GCCAGTTTAA CCCGTACCGA AAGTTGCGGG ATGAAGCTAT TGGATAGTAT TAGTTTAGAA CAGTTAAAAA TAGAGATTGA TCAAGGAACT TTTTCCTTAA TTTCTCCAGA TATTGCGTTA CAACATTTAG GTCAAATTAG TTTATCAGAA ACCGATACTC AACGATGGTT TCATGGACAA AGAATTGCTC AAGATTTATC TTTATTGTCT GATGTTGTCA GGGTTTATGA CAAAGGAGGG GACTTAATTG GAATAGGAAA CCTGGTTAAA CATGATAGTT ATCAGGTTTT GAGTCCGAAA ATTGTTTTTA AATTTGATGC AGAGGCACAG AGACGCAGAG AGATACTAGA AGGTTAA
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Protein sequence | MFGFIALNKP SGMTSHDCVA RVRKIIKQKK VGHGGTLDPA ATGVLPIAVG QATRLLAFLP ENKAYRAKIR LGVQTATDDL EGEVIRTQTA PNLTLEQVEP LLSQFLGSIQ QIPPMYSAIQ KDGKRLYELA RQGETPEVPS REVRIDDIKV INWYSSKFPE LELDIACGAG TYIRAIARDL GAMLNIGGTL ASLTRTESCG MKLLDSISLE QLKIEIDQGT FSLISPDIAL QHLGQISLSE TDTQRWFHGQ RIAQDLSLLS DVVRVYDKGG DLIGIGNLVK HDSYQVLSPK IVFKFDAEAQ RRREILEG
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