Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC8801_0527 |
Symbol | |
ID | 7102553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8801 |
Kingdom | Bacteria |
Replicon accession | NC_011726 |
Strand | - |
Start bp | 544845 |
End bp | 546575 |
Gene Length | 1731 bp |
Protein Length | 576 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643473631 |
Product | secretion protein HlyD family protein |
Protein accession | YP_002370774 |
Protein GI | 218245403 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCAAA GTAATGGAAA TGAGAATAAG GGAGCGATTG TTCCCCAAAA TGGAGCGAAT GGCCATAACG CCCTGACAAA ATCTGAAGGC AACGACCATC TCTTTGGTCA AAACTTCCTT GTCCCCATCA ATTCTGAACA AGCGGTGATT CTGCGTCAAT CTCCCATTTG GTCACGCGCC GTAGTTTGGA CAATTGTGGG AGTAACAACG GCCTCGGTCA TTTGGGCTGC CGTGGCCACC ATTGAACAAG TGGTCACAGC CAAAGGACAA CTTAAACCCC AAGACACCGT CAAGGAAATT CAAGCTCCTC TCAATGGCGT GGTTGAAGAG GTTTTAGTTA AAGATGGCGA TCGCGTTAAA AAAGGACAAG TTCTCGTATC GATGGATTCT GAGTCTACTA AAGCCGAATT AGTCTCCTTA ACCAAAGTTA AACAATCTTT GCAACAAGAG AACAAATTTT ATCGCACGTT GATGAATCAG TCGCTTGATC CGCTTCAAGT GCAAACCGAG ATAATCAAGC TGAAACTCCC CCCAGAAGTG GCTGCTTTAG CCCTTAACCG TACTAGCTTA ATCGTTGAAA ATCAACTTTA TGGGATTCAA TTAGGAGAAT CTAGTGCAGG GAGTGAACTG AGTCTCGATC AAGTGGCTCG ACTTCGAGCA GCCAAAGCCG AATTAGATTC AAGGGCGATG GCTGCTCAAT TGGAAATGGA ACAACTTGAG AAACAATTGC GACAAACCCA AGTACAGTTA GCGGATGCCA AAAAGCAATT AACTGATGAT CAAAAAGTCT TAGCGGAAAT TCAACAACGC AATACAGAAG CTAGAGCAGA AGCCCAAAAG GCGTTAAAAA TTGAAGAAGG AATCCTAAAA AATGTAGAAC CGTTATTAGA AGAAGGCGCT CTTGCTCAAT TGCAAGTTGA AAAACAAAAA CAAGCGATTG CTGAAAGAAG ACAACGCCTC ACCGAACAGA TTGCTAACGG AACTATTGAA TACGATAAAC AACGACAACA AATTCAGGAT CGCACGGCTG AGATTGCTCG TTTTGAACAA GAAGAACGAC GCTTAGAATT AGCTATTGCT CAAGCGAATG CTAAGTTAAA TAATACTGTT GTTCTTACGG AAAAAGAAGT GCGAGATAAA ATTTCACAAA ACAAACAAAG AATCGCTGAT ATTGATAGCC AGTTAACCAA AATCATTGTA GAAAATGACA AGAAAATTGC TGAAACTGAC AGCGAAATTA GTCGTACTAA TGTCACTTTA AAGTATCAAG AAATTAAAGC TCCTGTTAGT GGAACTGTCT TTGATTTAAA AGCTACTACT GGTTATGTTC CTCCTCCGAA TCAAACAGAA CCTTTATTAA AAATTGTGCC GGATGATCAG CTAGTAGCTG AAGTTGATGT CACCAATGAA GATATTGGGT TTGTTCGGAC TGGACAAAAA GCAGATATCC GCATTGATTC TTTTCCCTTT AGTGAATTTG GAGATATTAA AGGCGAAGTC ATTGCCATTG GTTCAGATGC CTTAGAACCT AATGAAATTC ATAAATATTA TCGCTTTCCA ACTAAAATTA AGTTAGATGA ACAAGTCCTA AGATCATCGG GTCGGGAAAT TCCTCTACAG TCTGGAATGT CGGTTAGTGT TAACATTAAA GTCCGAGAAA ATCGAACTGT ATTGAGTTTA GCAACTGAAT TGTTTACTAA GAAAGTTGAA AGTCTTAAAC AAGTCCGTTA G
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Protein sequence | MSQSNGNENK GAIVPQNGAN GHNALTKSEG NDHLFGQNFL VPINSEQAVI LRQSPIWSRA VVWTIVGVTT ASVIWAAVAT IEQVVTAKGQ LKPQDTVKEI QAPLNGVVEE VLVKDGDRVK KGQVLVSMDS ESTKAELVSL TKVKQSLQQE NKFYRTLMNQ SLDPLQVQTE IIKLKLPPEV AALALNRTSL IVENQLYGIQ LGESSAGSEL SLDQVARLRA AKAELDSRAM AAQLEMEQLE KQLRQTQVQL ADAKKQLTDD QKVLAEIQQR NTEARAEAQK ALKIEEGILK NVEPLLEEGA LAQLQVEKQK QAIAERRQRL TEQIANGTIE YDKQRQQIQD RTAEIARFEQ EERRLELAIA QANAKLNNTV VLTEKEVRDK ISQNKQRIAD IDSQLTKIIV ENDKKIAETD SEISRTNVTL KYQEIKAPVS GTVFDLKATT GYVPPPNQTE PLLKIVPDDQ LVAEVDVTNE DIGFVRTGQK ADIRIDSFPF SEFGDIKGEV IAIGSDALEP NEIHKYYRFP TKIKLDEQVL RSSGREIPLQ SGMSVSVNIK VRENRTVLSL ATELFTKKVE SLKQVR
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