| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_5557 |
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| Symbol | |
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| ID | 7112367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011730 |
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| Strand | + |
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| Start bp | 5300 |
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| End bp | 8812 |
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| Gene Length | 3513 bp |
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| Protein Length | 1170 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643483570 |
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| Product | conjugative relaxase domain protein |
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| Protein accession | YP_002380579 |
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| Protein GI | 218442251 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR02686] conjugative relaxase domain, TrwC/TraI family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGCTA CCGTAGGTCG ATGCTATACC AATCCCAAAG ACTACGCCCA GGAGAACTAT
TACTCAACAG GCGACGGATT GACCAACTCA GAATGGCTAG GGAAAGCCGC ATCAGAACAA
GGATTATTTG GACAAATCCA AGAACAACAT TTTCACAATG CCTACCAAGC ATTAGACCCC
AACGGCGACC CTTTACGAAG ACAGCAGAAC TACCGTAAAC AGGTTCAACG ACATAACCGC
CCTGGAACGG ATGTCACCCT CTCCGCCCCC AAAAGCATCA GCGTCGCTGC CCTCGTTATG
GGGGATAATC TTATACTGGA AGCCCACAAA GCCGCCGTCC GCGCCACAAT GAACTATGTA
GAAAAAAACT GCATTTTTTA CCAAACCAAA CAGAAGGGAA AAAAACTCCT TTTACAAAGC
AAAACCGCCC AGATAGCCGT CTTCCACCAC GACGATAACA GGAACAAAGA TCCCCAGCTT
CATAGCCACT GTGTTATCCT CAATCAAACC CTCTGCCCCG ATGGAAAATG GAGAGCCGTA
GCCAACGAAC AACTCTACAC TCAAATCAAA ACTATTGGTG CTTATTATGC CCATGAACTT
GCTCGTCAAT TGGAACAAAA TGGATGTAAA ATTCAATGGA CAGATGATCA TATTTTTGAA
CTAGCAGGAG TCGATAAAGA GAAACTCGAT GCTATTTTTT CAACTCGTAG TAACCAAATT
GAAGCCGAAT TAGAAAAACT GGGACTAACC CGAAAAACCG CTAATGCTCA GGTTAAACAA
ACCCTCTGTT TAAAGACTCG CAAAGAGAAA AAACATCACC ATCAACCCGA AGATAGGGAA
CGACAGTTAC AGAGATGGAA GCAGAGAGCA ACCGAAGCCG GTATAGAGAT AAATAGAGAA
CATAAAACCG GACTCGAAAA AGCTTATAAT CACCCCTCTC ATCCAGGCAG TATCCCAGAA
CTGCTCTCCG ATGCAAGTAA TATTCTTACC TCCCGACAAA CCGCCTTTAG AGAGCATGAA
TTACTCAAAG AATGTTTAAG ACAAAGCCAG GGCAAATATG ACCCAAACTT ACTACTAGCA
GAAATTAATC AGAAGGAAGA ACTTGTTCCC ACTAGAGACG GAAGATTAAC AACAAAAAGC
CAACTAAACA GAGAACGAAA GATTATTGAA TTAGCAAATA CGGGGAAAAA TAGCCGTATT
CCCTTAGCAA GCCGAGAACA AGCCCAAATT ATTGCCCAAA AGAGAGGTCT AAATACTGGA
CAAACAACTG CTCTCATCCA CATAGTAACT AGCAGAAATG CAGTGGTCTT AGTCCAAGGG
AACGCCGGTG TCGGTAAAAC CTATACGATG AACGCTTTAA AGCAAACAAT TGGGAATCAA
CCCATTCGAG GATTAGCACC CTCGGCTGCT GCGGCGGATG TCCTACAAAT TGAAAGTGGT
ATTTCTTCTC AAACCCTAGC CAGTTATCTA CTGACAAAAA ATGAACGACT CCCTAAAAAG
GAAATTCTCC TAGTAGATGA AGCCGGGATG CTCTCATCAG TCCAGATGGA ACAGCTTTTA
GAAAAGGCCC AGGCTAATAA TAACCGAGTT ATTTTAGTCG GGGATACTAA ACAACTCTCG
GCTGTCGAAG CCGGCGCACC CTTTAAACTC CTCCAAGAGC ATTCTTTACC TACAGCTATC
ATTGACCAAA ACCTCAGACA ACGTGACCCC TCTCTCAAAC AAGTGGTTGA CAAGATGGCC
ACTCATGACA GAGATGAGTC TAGTATTAAT CAAGCTTACC AAAGTTTATA CCATCAAGGG
AAAGTTAAAC AAATCGCACA AGAGAAAGAA CGAGTTGAAG CGATATCAAA TGACTACCTC
AGCCGCACCA CTGAAGTTAG AAATAAAACC CTAATCTTAG CGGGAACTAA TGCAGATAAA
CAAATCATTA CCACAGCAAT TCGTCAAGGA TTAATGAATG AAGGAGTATT AGGAAGTGAG
AGTAAAGAAT TACAAACCCT TAAACGTAAA GACCTTGATA AATTTGCTAT CACCAAGGCG
CACCATTACC AACGGGGGGA TGTGATTAAA TTTCAAATTG ATAATGCTCA ATTTAGTAGA
GACTTTTACT ACCGTGTCAC CGATGTGAAC TCCATAACGA ACACAGTAAC CCTAATTGAC
ACCAATGGCG TTGATTATAC CCTTCCCCTA GACAAATACA AACAAAGAGA AGTCTATCAA
GTTCAACAGT TAGAAATTCG TTTAGGTGAA CAGATGCGCT TTACTAAAAA CATCTCAAAC
CATGATTATA AACAGTTAAA CGGGCAACGG TTCACCGTAG TGGGATTTAC ATTATATGGT
CAGATTTCTC TTTTAACTAA AGGGAAAACC ATGAGCGTGT CCCCATCTCA ATTATTACAT
AGTGATTATC GTTATGTGGA CACAGTGCAT AGTAGTCAAG GACAAACGGC TGATTATTGT
ATTTACTGTG CTTCCGCAGC AAAAAGTTTG ACCATTGGAC GAGAAAGTTT TTATGTGGCC
GCTAGTCGAG CTAAACAGGA ATTTATTGTT TATACGGCTA ATGCTACAGA TTTAGGGGTG
ACAGTCCAAA TTAGCAGAGC TAACGAAAAT GCTTCAGATT TAGTCAAAAA ACAAGTAGAA
GAAGGACAAA AATCATCTCC CTCTGAAAAC ATATCTACCG CACCATCATT AACTCATCCC
TTTGCCCCTA AAACTGACAA GGATGAAAAA GCCTCCTTTG ATAACCAATT GAGTCAACTG
AGTGATGCAG AACTTGTCTC AGTCGCGTTA TCTGTGCAGG AGTGGCTCTC ATCTGCCCCA
AGAGAGCCTT CTTTAAATAA AGAGAAAGCT TTAAGGAGCG AAATCGAAGA ATTACAGCAT
CATCAAATTA AATTAAATAA ACAACTCGTA ACCCAAAAAC AGGAATCCCT TCAGTTAGGT
GAACCTCGTT CTTTGTTCAA TCCTTTTGGG GTTAGTAAGG AAATAATTGA CAACCAACTT
CAAAAAATTC AGTTAACTTC ATCCCTATTA CATGATATTG AGTTTGAATT AAAGAAAACA
AAAAACAGTT TTCAAAAATG GCAATCTGAA GCCAAAGCCT ATTCCCTTTG GGAAGAAAAC
CCAAAAACGA AGAAAGTCAA ACAATTAGCG GAACAATTAA AATCACAGAC TATAAAAGAA
CGAATTGCTC GAATTAAAGA AGGATACGTC CTGTATGGAC TTGCTCAAAC AATTCTTGAT
CTTAAAGGGA AGAAGTTAGA AGATGGAAAA TATTTTCAGG GTAATATTTA CAGAATTCAG
CAGCGAGAGA CAACTTTAAC TATCTCTCAT AAAGACTATG ATGAACCCTT GTTTGTTGCT
ACTGATAATA GGGCAAACGG AGGAATTATT GAAGTTAGCC AGTGTAATTT AACCTTATTG
GATAAGGAAA ATATTCAGAG TGCGGCTAAA TATTTAGAAG AACAGAAAAC CCAAAGTTCT
CAAAAAAACC AAAGTAAAGG ATTTAGTCGT TGA
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| Protein sequence | MVATVGRCYT NPKDYAQENY YSTGDGLTNS EWLGKAASEQ GLFGQIQEQH FHNAYQALDP
NGDPLRRQQN YRKQVQRHNR PGTDVTLSAP KSISVAALVM GDNLILEAHK AAVRATMNYV
EKNCIFYQTK QKGKKLLLQS KTAQIAVFHH DDNRNKDPQL HSHCVILNQT LCPDGKWRAV
ANEQLYTQIK TIGAYYAHEL ARQLEQNGCK IQWTDDHIFE LAGVDKEKLD AIFSTRSNQI
EAELEKLGLT RKTANAQVKQ TLCLKTRKEK KHHHQPEDRE RQLQRWKQRA TEAGIEINRE
HKTGLEKAYN HPSHPGSIPE LLSDASNILT SRQTAFREHE LLKECLRQSQ GKYDPNLLLA
EINQKEELVP TRDGRLTTKS QLNRERKIIE LANTGKNSRI PLASREQAQI IAQKRGLNTG
QTTALIHIVT SRNAVVLVQG NAGVGKTYTM NALKQTIGNQ PIRGLAPSAA AADVLQIESG
ISSQTLASYL LTKNERLPKK EILLVDEAGM LSSVQMEQLL EKAQANNNRV ILVGDTKQLS
AVEAGAPFKL LQEHSLPTAI IDQNLRQRDP SLKQVVDKMA THDRDESSIN QAYQSLYHQG
KVKQIAQEKE RVEAISNDYL SRTTEVRNKT LILAGTNADK QIITTAIRQG LMNEGVLGSE
SKELQTLKRK DLDKFAITKA HHYQRGDVIK FQIDNAQFSR DFYYRVTDVN SITNTVTLID
TNGVDYTLPL DKYKQREVYQ VQQLEIRLGE QMRFTKNISN HDYKQLNGQR FTVVGFTLYG
QISLLTKGKT MSVSPSQLLH SDYRYVDTVH SSQGQTADYC IYCASAAKSL TIGRESFYVA
ASRAKQEFIV YTANATDLGV TVQISRANEN ASDLVKKQVE EGQKSSPSEN ISTAPSLTHP
FAPKTDKDEK ASFDNQLSQL SDAELVSVAL SVQEWLSSAP REPSLNKEKA LRSEIEELQH
HQIKLNKQLV TQKQESLQLG EPRSLFNPFG VSKEIIDNQL QKIQLTSSLL HDIEFELKKT
KNSFQKWQSE AKAYSLWEEN PKTKKVKQLA EQLKSQTIKE RIARIKEGYV LYGLAQTILD
LKGKKLEDGK YFQGNIYRIQ QRETTLTISH KDYDEPLFVA TDNRANGGII EVSQCNLTLL
DKENIQSAAK YLEEQKTQSS QKNQSKGFSR
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