Gene PCC7424_5041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5041 
SymbolnusB 
ID7107187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand+ 
Start bp5602696 
End bp5603334 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content40% 
IMG OID643483251 
Producttranscription antitermination protein NusB 
Protein accessionYP_002380261 
Protein GI218441932 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.264759 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCCTC GTCAACAACC CCGCCGAATT GCTAGAGAAT TAGCCCTTTT AAGTCTGAGT 
CAAATTAAAG GCTCTTCAGA CAAACTTGAA CAAGTAGAAT TAAATAATTT AGTAATAGCT 
GCTATTCGCA CTTTATCCGG AGAAGTTCAA GAAAGTTTAG AAACGGCTGC CGCCGAAGTC 
AGTCGTTCTC AAGAGCGTTT GTTAGCCAGT GAAACTAGAG CAACTAACTT AAAAAGCGCC 
CAAACGATGG TGACAGAAGC TTTAGAATTG ACCCAAAATG CCATAAATCG ATTGGCGGCT 
ATGGTAGAAA TCCCCGAAAT GGTTCAGCTA TCGAGTCAGT ATGAAGTCCG AGAATATGCT 
TTAGAAATTA TTCAAACCGT TTACCGCAGA CAGACAGAAA TTGAACAAGA ATTAGCTACA 
GTGATGGTAG ATTGGCAATT AAATCGTTTA CCGAAAATCG ATCGGGATAT TTTACGAATT 
GCGGTAGCAG AAATGATCTT TCTCGAAGTC CCCCAAAAAG TAGCGATTAA TGAAGCGGTA 
GAAATTGCAA AACGGTATTC CGATGAAGAA GGATATCGCT TTATTAATGG GGTTTTACGA 
CGGGTAACGG AACGATTAAA AACAGAAGCT AGACGCTAA
 
Protein sequence
MSPRQQPRRI ARELALLSLS QIKGSSDKLE QVELNNLVIA AIRTLSGEVQ ESLETAAAEV 
SRSQERLLAS ETRATNLKSA QTMVTEALEL TQNAINRLAA MVEIPEMVQL SSQYEVREYA 
LEIIQTVYRR QTEIEQELAT VMVDWQLNRL PKIDRDILRI AVAEMIFLEV PQKVAINEAV 
EIAKRYSDEE GYRFINGVLR RVTERLKTEA RR