| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_5029 |
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| Symbol | |
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| ID | 7107175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | - |
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| Start bp | 5587742 |
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| End bp | 5589028 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643483240 |
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| Product | twitching motility protein |
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| Protein accession | YP_002380250 |
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| Protein GI | 218441921 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.580739 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGCAAA CACCACGCCC TCCTGTTCAA CCGGTTCCCC CGCTCCCTGT TCCTCCTCTC
CCTGTTCCCC CTCTTCCCAC CTCCCCACCC CCCAGTAACA GTCAAGTTTC CTCTGGTGGG
GCTACTTCTC AAACCAATAT TGAGACAGTA ACCCGTCCAA CCCCTTCACC CCCTCAAAAA
CCTGCTTCTA ACGGACGAGC AGTCGCTTCT AACGGACGAG CCGCAGGAAT GCCGGCATTA
GAAGAATTAG TCCGTTTAGC CTACGATGAA GGGTATTCTG ACGTTCACTT GGGGGTAGGA
GAACAACCCC GAATGCGCGA TCGGGGTCAA ATGGTCATCC TTGACTATCC CGAAGTCGAC
CACAATACTT TTATGAGTTG GTTAAGGGAA ATTCTCAAAG AAGATGAAAT TCAAAAATTT
AAGCGAGAAT TAGAATTTGA CGGAGCGACT CAATACGAAT TTGCTAGAGT GCGGATTAAT
GTTTTTGATA CGTTGCGGGG TCATGCTTTA GTTTTACGTC TAATTCCGGT GAAAATTTTG
ACTATGGAGC AATTAAGATT GCCTATGGTT TTTAAAGACA TTTCAGATGC TCATAAAGGA
TTAATTCTCG TCACAGGGCC AACCGGTTCA GGTAAATCTA CCACGATGGC AGCAATGGTA
GATTATATTA ATAAAGAACA CCCTAAACAT ATTATTTCTA TTGAAGATCC GGTTGAATTT
GTTCATCAAA GCCGTCGTTC TCTGATTAAA CAACGGGAAG TCGGGCAAAA TACCCTGAAA
TTTGATAACG CCCTGAAAGC GGCTTTACGG GAAGATCCGG ATATCATTCT AGTTGGGGAA
ATGCGGGACA AAGAAACCGT CAATACTGCC TTAAAAGCTT CTCAAACGGG TCACTTAGTT
ATGGGAACGC TCCATACTAA TAGTGCGATT AAAACTATTG AACGGATTCT TACCCTCTAT
AGTGCAGAAG AACAAGATGC GATGCGAGTT GCGATCGCTG AATCTTTAGT AGCGATTATT
GCTCAAGGGT TATGTAGAAC GACGGATGGT AAACGGGCGG CCTTTCATGA CATTTTAGTG
AATACAGAAA CGGTTAGAGA TTATATTCGC CAAGGTAAAT ATGATGAAAT TGCTGAACTG
ATGAAAAATG GGGAGTATGA TGGTATGATT ACCACCAATC AATCCTTATT TAATCTTTAT
CAAGAAGGAC GGATTACAGA AGAAACGGCT TTAGAAATGT CACCCGTTCC TAATGAATTA
GCGATGATGC TACGGGGAAG AGTCTAA
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| Protein sequence | MTQTPRPPVQ PVPPLPVPPL PVPPLPTSPP PSNSQVSSGG ATSQTNIETV TRPTPSPPQK
PASNGRAVAS NGRAAGMPAL EELVRLAYDE GYSDVHLGVG EQPRMRDRGQ MVILDYPEVD
HNTFMSWLRE ILKEDEIQKF KRELEFDGAT QYEFARVRIN VFDTLRGHAL VLRLIPVKIL
TMEQLRLPMV FKDISDAHKG LILVTGPTGS GKSTTMAAMV DYINKEHPKH IISIEDPVEF
VHQSRRSLIK QREVGQNTLK FDNALKAALR EDPDIILVGE MRDKETVNTA LKASQTGHLV
MGTLHTNSAI KTIERILTLY SAEEQDAMRV AIAESLVAII AQGLCRTTDG KRAAFHDILV
NTETVRDYIR QGKYDEIAEL MKNGEYDGMI TTNQSLFNLY QEGRITEETA LEMSPVPNEL
AMMLRGRV
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