Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_4947 |
Symbol | |
ID | 7107013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 5494213 |
End bp | 5496006 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643483159 |
Product | TrkA-C domain protein |
Protein accession | YP_002380169 |
Protein GI | 218441840 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0471] Di- and tricarboxylate transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 0.816628 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAAAA TACTTCTTAC TCTTGGGGTT GTCGTTGTTG CTTTAGTTTT TTTTGTGGGA GAATGGTATC CCGTTGATTT TATTGCTCTT TGTATTCCAA TTGTTTTAAT TATTTTAGGA TTAGTTAGTC CGGATGAAGG AATTTCTGGG TTTAGTAATT CGGCGACGAT TACGGTTTTA GCGATGTTTA TCCTCAGCGC AGGAATTACT CGTACCGGGG TGATTCAAAT GGTGAGAGAT TTATTAGTTA GATGGGGAGG ACGTACAACC ACTAAGCAAA TTTTAGCTCT GGGATTGGTT GTAGGGCCGA TTAGTGGATT TATTAATAAT ACGGCTGTCG TTGCTGTTTT TCTGCCTATT GTGGAAGACT GGTGTAAGAA AAGAAAGATT TCTCCCTCAA AAATGCTGAT TCCTCTATCT TATGTCACCA TTTTAGGAGG AATGCTGACC CTGATTGGCA CATCAACTAA TGTACTAGCC AGTGGGGTAT CCGCTCAATT AGGCTATGGT GAATTTGGAC TATTTCAATT TACTTTACTT GGGGTTGTGA CTTTTCTTTC TGGATTGTTT TATGTCGCGT TTATCGCTCC TCGTCTATTA CCAAAAAGAG ATCCTAATTC AAATTCATTG AACCAAGATT ATAAACTCGA AGACTATGTT AGTGAAGTGA TTATTACACC CGGTTCAAGT TTGATTGGTA AAACTCTACG TCAAAGCGGA ATCCAAAGAA AATTTGACTT AGACGTTTTA GAAATTATTC ATAATGGGAA TCATTTTCCT CAGCCTTTAG CGGATAAAGT TTTACTCGCT GGAGATATTT TATTAGTTAG AGGGGGTCGA GAAGATTTAC TTAAAGTGAG AGACGCTAAA GAAATTGAAA TTTTAGCCGA TGTTAAATTT GGAGAAAAAA GTGTCGAGGA TGAAATTTCA ACGGGAGAAG AAAAAGTTGC TGAAGTTTTA ATTTTATCTA ACTCCCGTTT AATCGGGTCA ACCTTAAAAG ATTTACGCTT TAGACAGCGA TATAACGCAA CCGTTTTGGC GATTCGTCGC GGACAAGAAT TAGTCAGAGA ACGCTTAGGT AAAGTTCCCT TACGTTTCGG GGATTTAATG TTAGTTCAAG GGCCAAAAGA AAGTTTTATT GGTTTACAAA CCAGTCGAGA ACTTCTAGTT ATCGAAGAAC GAGACTTAGA AACCTTAAGA CAAAATAAAG CTTGGATTTC TTTAGCCATT GTTGTCGGGG TTATTTTAGT GGCGGCTTTT GATTGGCTAC CGATTTTAGT ATCCTCTTTA ATCGGGGTTA TTTTAATGGT CTTTACCGGA TGTCTCAAAC CTGGGGAAAT TTATGGGTCA GTTCGTTGGG ATGTGATTTT TCTCCTAGCG GGTTTAATTC CTTTAGGAAT TGCTATGGAC GAGTCTGGCG CTACCGAATG GTTAGCCAAG AACTTAGCGA GTTTAGGGGG TAACTTATCT GGTTTTTGGA TTTTATTATT TTTCTTTGTC ATCACTTCTT TACTTACAGA AATTATCTCA AACAATGCGG CTGTTGTTTT GATGATTCCC ATTGCGGTGA AAGTGGCAGA AACTTTAGAC CTGAATGTCT ATGCTTTTAT GTTTGCTGTT ACTTTTGCGG CTTCTAATAG TTTTATGACT CCCATTGGTT ATCAAACTAA CACAATGGTT TATAGTGCAG GGGGTTATCG GTTTATTGAT TTTATTCGGG TCGGTGGGCC GTTGAATTTA TGGATGGCAA TCATTACACC GATATGTATT GCTTTGATCT ATGGAATTAA ATAA
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Protein sequence | MDKILLTLGV VVVALVFFVG EWYPVDFIAL CIPIVLIILG LVSPDEGISG FSNSATITVL AMFILSAGIT RTGVIQMVRD LLVRWGGRTT TKQILALGLV VGPISGFINN TAVVAVFLPI VEDWCKKRKI SPSKMLIPLS YVTILGGMLT LIGTSTNVLA SGVSAQLGYG EFGLFQFTLL GVVTFLSGLF YVAFIAPRLL PKRDPNSNSL NQDYKLEDYV SEVIITPGSS LIGKTLRQSG IQRKFDLDVL EIIHNGNHFP QPLADKVLLA GDILLVRGGR EDLLKVRDAK EIEILADVKF GEKSVEDEIS TGEEKVAEVL ILSNSRLIGS TLKDLRFRQR YNATVLAIRR GQELVRERLG KVPLRFGDLM LVQGPKESFI GLQTSRELLV IEERDLETLR QNKAWISLAI VVGVILVAAF DWLPILVSSL IGVILMVFTG CLKPGEIYGS VRWDVIFLLA GLIPLGIAMD ESGATEWLAK NLASLGGNLS GFWILLFFFV ITSLLTEIIS NNAAVVLMIP IAVKVAETLD LNVYAFMFAV TFAASNSFMT PIGYQTNTMV YSAGGYRFID FIRVGGPLNL WMAIITPICI ALIYGIK
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