Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_4310 |
Symbol | |
ID | 7108232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 4778779 |
End bp | 4781040 |
Gene Length | 2262 bp |
Protein Length | 753 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643482531 |
Product | capsular exopolysaccharide family |
Protein accession | YP_002379545 |
Protein GI | 218441216 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0489] ATPases involved in chromosome partitioning [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAGGAGA TAGGTACGGC TAGGCGATTA CAACCCAAGG GCAACAAAAG AAAAGCTCAA CTTCGCTCTC GAATACCAAT GGTTAGAGTT GACGATGATG AACCCTTGAT GAATCGTCCA ATGGGGAAAA TTTTAACCGA TCGGCTCGGT TTAATTATAG TGGTAGCCCT AGGAGTAACT ACGGCGATCG GCCTGTGGAC ATTTAAGCAG ACTCCTCGCT ATGTGGGAAA ATTTCAACTT TTAATTGAAT CCGGGCAAAA TCAACCAAAT CTTAATCAGT TGCCTTTAGA AGGAAACACC AGTAATGAAG TAGAATTGCG GACTCAAATA GAAGTATTAC GCAGTCCTAA AGTTCTTAAC CCTATTTTCC AAAAGATTTC TCCTCGTTAT CCTGATTTAG ACTATAAAGG TTTAGCCCAA AAAGATCCCA CTCAAGAACA ACCTTTTAAA ATTACTCGTC TAGAAAATAC CAATATATTA GAAGTCACTT ATGAAGATGA AAATCCCCAA AAAATTCGTT TCGTTCTCCA AAATCTGGCT GATGCTTATT TAAAGCATGG TTTAGAATTA CGAGAATCAG AACTGAAACG GGGGATAGAA TTTGTTAATC AGCAGTTACC TAAATTACAG CAACAGGTGG CTAAATATGA AGAAAGCTTA CAAAAACTGA GACAAAAATA TAATTTAATC GATCCTCAGC AACAGGCTAC TCAGTTGTCA CAACAATTAA CTCAGTTAGA AACTCATCTG TTTAATACTC AAGTTCAGTT AAAAGAAACC ACATCTTTAT ACAACAGCTT GCAAACTCAA GTAGGCGGAA ATACTGAGCA AGCTTTAACC TCTAGCTATT TGAGTGAGTC TCCCCGATAT CAACACCTGC TCAATCAATT ACAACAAGTA GAAATTGAAC TTTCGCAACA GTCAACCATT TTTTTAGATG ATAGTCCAGT CATTCAAACG CTTAAGGAAA AACGGGATAA TTTACAAGCA CTTCTTCAAC AAGAAGGCAG TAAAATTTTA GGCAACAATT CAGTCAATAA GACCAATCAA TTAACTTCAT CAGATTCTCC CAGTTCTGTC CGGTTAAATC TGAATCAACA ATTAGTTCAA TCAGCCAACC AAATTGATGT TTTAAAAACG CGACATTCGG TTTTAGAAAA ACAAATTAAA GAGTTAAAAT CTCAACTTGA ACAGATGCCG GCCATTACGC GGCAATATTC AGATATACAA CGGCAAATCA CCGTAGCGAC AGAAAGCTTA CGTCGGTTTT TAGATGCTCA AGAAAAAATT CAAATTGAAG CGGCTCAAAA TGTTTCTCCT TGGGAATTAA TTACTGAACC GATGATCGGA AAAAAACCCG TTTATCCTAA TCGAACTCAG TATTTAAGTT TAGGAGCGAT CGCTGGACTT TTATTAGGAG TAATCGCTGC GGTTGTCGCG GAAAAATTAG ATAATAAATT TCATTCTCCT GAAGACTTAC AAGAGGTTAC ACGACTGCCA ATTTTGGGTT ATATTCCTTG GCAGAAAAAT CTTCACCGTC TTCAACCTTT TGAAGGTTTC AAAACACAAA GTTCTGAGTC TGAAGGGTTA ACTTCTCTGT CTATTGCTTC CCAGAAACTT CCTTCTTCTT TTGGTCGCTT GTCCGCTTTT TTAGAAGCTT GTATGTTGAT GTATGCCAAC ATTCAGGTAT TAGATTCTCA TCAACCTTTA AAGTCAATTG CCATTAGTTC AACAACAGCA AGAGAAGGAA AATCGACTAT TGCTTTATAT TTAGCTAAAG TGGTGGCTAT GATGGGACAG CGAGTTTTGT TGATAGAAAG TGATTTAAGA CATCCTCAAT ATTATCAATG GATTGATATT CCTTATCAAC AAGGACTGAG TGAAGTGTTA TCCCTGAATT TAGACGTAGC TGATGTAATT CAAAAAGTGC CGCAATGGGA TAATTTATCA GTGTTAATGG CAGGAGATAT TCCTTCTCAT CCTGCCAGAT TATTAGGGGG TGAAAAAATG CAAGACATAA TGATTAAATT AGAGCAAGAA AATGACTATG ATTTAATCAT TTATGATACT CCCCCGTTAT TAAATTTTGC TGATGCTAAG ATTGTGGCAG CCTTGACTCA AGGCATTATT TTAGTGACTA AAATGGGTAA AACTGACCGG AAAGCCTTTA AACATTGTGT GGATGAATTA AGAGGCTCTC AAATTGCCCT TTTAGGCTTG GTGGCTAATG GGGTCAGCCG TTCTCATCAA ACTTTAACTT AA
|
Protein sequence | MEEIGTARRL QPKGNKRKAQ LRSRIPMVRV DDDEPLMNRP MGKILTDRLG LIIVVALGVT TAIGLWTFKQ TPRYVGKFQL LIESGQNQPN LNQLPLEGNT SNEVELRTQI EVLRSPKVLN PIFQKISPRY PDLDYKGLAQ KDPTQEQPFK ITRLENTNIL EVTYEDENPQ KIRFVLQNLA DAYLKHGLEL RESELKRGIE FVNQQLPKLQ QQVAKYEESL QKLRQKYNLI DPQQQATQLS QQLTQLETHL FNTQVQLKET TSLYNSLQTQ VGGNTEQALT SSYLSESPRY QHLLNQLQQV EIELSQQSTI FLDDSPVIQT LKEKRDNLQA LLQQEGSKIL GNNSVNKTNQ LTSSDSPSSV RLNLNQQLVQ SANQIDVLKT RHSVLEKQIK ELKSQLEQMP AITRQYSDIQ RQITVATESL RRFLDAQEKI QIEAAQNVSP WELITEPMIG KKPVYPNRTQ YLSLGAIAGL LLGVIAAVVA EKLDNKFHSP EDLQEVTRLP ILGYIPWQKN LHRLQPFEGF KTQSSESEGL TSLSIASQKL PSSFGRLSAF LEACMLMYAN IQVLDSHQPL KSIAISSTTA REGKSTIALY LAKVVAMMGQ RVLLIESDLR HPQYYQWIDI PYQQGLSEVL SLNLDVADVI QKVPQWDNLS VLMAGDIPSH PARLLGGEKM QDIMIKLEQE NDYDLIIYDT PPLLNFADAK IVAALTQGII LVTKMGKTDR KAFKHCVDEL RGSQIALLGL VANGVSRSHQ TLT
|
| |