| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_1169 |
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| Symbol | |
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| ID | 7112298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | - |
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| Start bp | 1283987 |
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| End bp | 1285657 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 643479436 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_002376488 |
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| Protein GI | 218438159 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA GATTAAAAAT CTTAATTGTA GGGTTTTTCA TGACATTTTT GATAGTTATG
AGTATCCCCT TGGTAGCAGC ACAGCAAACT CCCTCTCCTC CATCTCCCAA ACCTACCAAA
CAACAAGAAG GTGTTCCCGT TGTTTTCAAT GAAGATACTC TTTTTACCAT TAAAGAAAGA
TTTGGAGGAT ATTCTCCCGA AACTCGTGTT GAAGTCATTA CTCAACGGTT ACAAGACTAT
GCAAAAGATT ATACACTTCC TGTAAATGAT CTTAAAATTG TCTCAGAAAA GATAGAAAAT
ATTCCTTTAA GTGTTATTAC CGGAGACAAT ATTGAAATTG TTACGATTAC CAATAGAGAT
GCTCAAGCCG CCGAATATGC CCGAGACGAA TTAGCACAAA TTTATTTACA AAAAATCAAG
AAAGCCATTA GTCACTATCG GGAAGAAAGA AGTACAGGTA ATCTCATTCG AGGGGTGATT
TTTACGATCG TTACTACGAT AATATTATTA ATTTCTCTAT TTATTATTAA TAATATTTTT
ACCAAAATTT ATCAAAGACT AAAAGCTTGG GGAAATACTC ACATTCGGCC AGTTTATATT
GGTACTTTTG AATTAATTCG AGCTAATCAA CTGGATAATA TTCTTATTTT TGTAACTCAA
GTTACCCAAG CTTTAATTAT TGTGGGGTTA TTTGTTATTT ATTTTCCGTT AATTTTTAGT
CAGTTTTTCT GGACACAAGG ATGGGCGGTT ATCTTTTGGA ACTCGATTTT TCAAACTTTA
GAAACTGGAT GGAATGCGTT TAGTAATTAC TTACCCAATT TACTAACAAT TATTTTAGTG
ACTACGATTA CCTATATAAT TTTACGGTTT TCTAAACCGT TTTTTCATGA ATTAAGCCAA
GGAGCGTTTC ATCTACCGAA TTTTTATCCT GAATGGGCTT TACCGACTTA TCGTCTAATT
ACTTTTCTAA TTATTGCTCT AGCAACGATT ATTGTTTTTC CTTTACTTCC TGGATTTAAT
TCTCCGGCAT TTCAAGGAAT TTCTGTATTT TTGGGGATAC TTTTTTCTTT AGGTTCGACC
TCCATTGTAG CTAATGTTGT GTCTGGAACA ATTCTAATTT ATACTAGGGC TTTTCGTGTT
GGTGATCCGA TTAAAATTGA TGATAAATTT GGTCAAGTCA TTGAAACAAC CTTACTGGTA
ACTCGTTTGT TAACTCCCAC TAATGAGGTA ATTAGTATTC CCAATTCTGA AATTATTACC
AGTTCTATTA TGAACTTGAA TTTTGCGACA AAAGAACTGG ATAAACCTTA TATTGTTAGA
ACTACAGTAT ATTTAGGGTA TGAAGTGCCT TGGCGTAAAG CTTATGAGGC TCTCATGGAA
GCGGCGTTAA AAATGGATGG AGTGGCTGAT TTTCCTGCTC CTTTTGTGTT ACAAGGAGAA
CTGAATGATG TTTATGTGAC TTATTCGTTG AATGTCTATG TTAATCAAGA CTATTTTAAA
GATAAAACCG CAACAGATTT AGAAAAAACT CGCTCTAAAT TACACGAAAA TATCCGAGAT
TGTTGTCAAC AAGCGGAAAT TAGAATTTTT GCTCCTAGCT ATGAAGCAGA TCCTACTGCT
TATGGTCCGG CGGCAGAGAG TTTTGTGTTA CCATCAGGGG AAAATAATTG A
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| Protein sequence | MKKRLKILIV GFFMTFLIVM SIPLVAAQQT PSPPSPKPTK QQEGVPVVFN EDTLFTIKER
FGGYSPETRV EVITQRLQDY AKDYTLPVND LKIVSEKIEN IPLSVITGDN IEIVTITNRD
AQAAEYARDE LAQIYLQKIK KAISHYREER STGNLIRGVI FTIVTTIILL ISLFIINNIF
TKIYQRLKAW GNTHIRPVYI GTFELIRANQ LDNILIFVTQ VTQALIIVGL FVIYFPLIFS
QFFWTQGWAV IFWNSIFQTL ETGWNAFSNY LPNLLTIILV TTITYIILRF SKPFFHELSQ
GAFHLPNFYP EWALPTYRLI TFLIIALATI IVFPLLPGFN SPAFQGISVF LGILFSLGST
SIVANVVSGT ILIYTRAFRV GDPIKIDDKF GQVIETTLLV TRLLTPTNEV ISIPNSEIIT
SSIMNLNFAT KELDKPYIVR TTVYLGYEVP WRKAYEALME AALKMDGVAD FPAPFVLQGE
LNDVYVTYSL NVYVNQDYFK DKTATDLEKT RSKLHENIRD CCQQAEIRIF APSYEADPTA
YGPAAESFVL PSGENN
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