| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_0453 |
|---|
| Symbol | |
|---|
| ID | 7107398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 500687 |
|---|
| End bp | 502393 |
|---|
| Gene Length | 1707 bp |
|---|
| Protein Length | 568 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643478726 |
|---|
| Product | protein of unknown function DUF87 |
|---|
| Protein accession | YP_002375787 |
|---|
| Protein GI | 218437458 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0433] Predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 65 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAC AACCCCTCGG TTTTGTAATT GAAGGTTCTC TTTCAGAAGG ATTACAGATA
CGTCTCCATC CCGATGTTTC TGTAGAGGAT ATGCGAGTCG GGAAATTTTT GGTCGTTCAG
GGTATGCGAT CGCGGTTTTT TTGTCTCCTT ACAGATGTTT CGTTAGGAAC AGCTAACGCG
AGAATTTTAG CGAATCCTCC GAGTATTGAT GATACTTTGA TGTTAGATAT TTTGGCCGGC
AGTGGGACTT ACGGGACGAT CGAATTATGT CCGATGTTGA TGTTTACGCC TACTGGGGGA
CATAAACCCG CCGTAAATGG GAATAATGGG AAAAGTTCTC TCGCTTCTTT TGAACCGCAA
ACTAATATTG ACCTAGAATT ATTACCCGTT AAAACCATTC CTGCCCATTT TAGCCAAGTT
TATGAAGCGT CAGAAAGTGA TTTTCGGATG GTGTTTGGAT GGGAAGATGA TCCGACTCGG
CGCAATTTTG CTATTGGGAA ACCATTAGAT ATGGATGTTC CCATCTGTAT CGATCTCGAT
CGGTTTGTGG AAAGGAGTAA TGGGGTTTTT GGAAAATCTG GAACAGGAAA ATCCTTTTTA
ACTCGTCTAT TAATTTCCGG AATTATTCGT AAACAGGCGG CAGTTAATTT GATGTTTGAT
ATGCACTCCG AATATGGATG GGAGGCGATG CAGGAAGGAA AACAAATTTC TACCGTTAAA
GGTTTGCGTC AATTATTCCC CGGACAAGTG GAAATTTATA CCCTTGATTC CCAGTCTACC
CGACGACGAG GGGTAAGGGA TGCTCAAGAA CTTTATCTGA GTTACGATCA AATTGAAATT
GAAGATATTC GCTTAATTGC AGGAGAATTA GGATTATCAG AGGCGAGTAT TGATAATGCT
AATATTCTTT ATGCTGAGTT TGGTCAATCT TGGATTACTC AATTAGTCCA TATGAGTAAT
GAAGATATTA AGAATTTTTG TTTAGAAAAA CAAGGTCATC CGGGTTCAAT TATGTCTTTG
CAGCGTAAAT TAATGCGTTT AGATACTTTA AAATATTTAC GCAGTGTTTG CCCTCATAAT
TATATCGATC AGATTTTACA ATCTTTAGAT GCCGGTAAGC ACGTAGTTGT AGAATTTGGA
TCTCAGGGAA ATATGCTCTC TTATATGTTA GCCACGAATA TGATTACCCG TCGTATTCAT
GCTAAATATG TAGAGAAAGC CGAATTATTT TTACAGACGA AAAGACCGCA AGATCGTCCC
CGTCAATTAG TAATTACCAT TGAAGAAGCC CATCGATTTT TAGATTCTAA AATTGTTCAT
CAAACGATTT TTGGCACGAT TGCTAGGGAG ATGCGAAAAT ATTTTGTGAC TCTGTTAATT
GTGGATCAAC GACCTTCAGG AATTGACAAT GAAGTGATGT CTCAGGTGGG AACTCGGATC
ACTTGTTTAT TGAATGATGA AAAAGATATT GATGCTATTT TTACCGGGGT ATCTGGTGGG
GGAAATTTGC GATCGGTTTT AGCTAAATTA GATTCTAAAC AACAGGCGTT AATTTTAGGC
CATGCTGTTC CGATGCCGGT TGTCATTAGA ACTCGTCCTT ACGATCAACA ATTTTATGCT
GAAATTGGGG AAACTGATTG GTCAATTATG CCGGATGAAA TGGTGATAGA GGTTGCCAAA
TCCGCTAAGG CAGATTTAGG ATTTTAA
|
|---|
| Protein sequence | MSEQPLGFVI EGSLSEGLQI RLHPDVSVED MRVGKFLVVQ GMRSRFFCLL TDVSLGTANA
RILANPPSID DTLMLDILAG SGTYGTIELC PMLMFTPTGG HKPAVNGNNG KSSLASFEPQ
TNIDLELLPV KTIPAHFSQV YEASESDFRM VFGWEDDPTR RNFAIGKPLD MDVPICIDLD
RFVERSNGVF GKSGTGKSFL TRLLISGIIR KQAAVNLMFD MHSEYGWEAM QEGKQISTVK
GLRQLFPGQV EIYTLDSQST RRRGVRDAQE LYLSYDQIEI EDIRLIAGEL GLSEASIDNA
NILYAEFGQS WITQLVHMSN EDIKNFCLEK QGHPGSIMSL QRKLMRLDTL KYLRSVCPHN
YIDQILQSLD AGKHVVVEFG SQGNMLSYML ATNMITRRIH AKYVEKAELF LQTKRPQDRP
RQLVITIEEA HRFLDSKIVH QTIFGTIARE MRKYFVTLLI VDQRPSGIDN EVMSQVGTRI
TCLLNDEKDI DAIFTGVSGG GNLRSVLAKL DSKQQALILG HAVPMPVVIR TRPYDQQFYA
EIGETDWSIM PDEMVIEVAK SAKADLGF
|
|---|
| |