| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_0243 |
|---|
| Symbol | |
|---|
| ID | 7110487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | + |
|---|
| Start bp | 269216 |
|---|
| End bp | 269908 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643478518 |
|---|
| Product | riboflavin synthase subunit alpha |
|---|
| Protein accession | YP_002375579 |
|---|
| Protein GI | 218437250 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0307] Riboflavin synthase alpha chain |
|---|
| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 0.13114 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTTACAG GATTAATTCA AGGTTTAGGG ACGATTAAAT CTCTCTCTCA AGATCGTTTT
ACCCTTTCAG TGTTGCCAAG TGCCACTGAT TCTATTTTAT CTGATTTAGT TATCGGAGAT
AGTGTAGCCG TCGATGGAGT CTGTCTAACC GTTGAAGAAA TTTTATTAGA TGGGTTTATT
GCCACTGCTT CTCCTGAAAC CTTACAAAGA ACGACATTAG GAAGACGAGA AAGGGCAGCC
GAGTATATTA ACTTAGAAAC CTCTTTGAGG GTAGGTAGTA AATTAGGGGG ACATTTTGTA
ACCGGTCATG TAGATGGGTT AGGGTGTTTA GAAAAGGCCA TATCGACGGA AAAATCTTGG
GAAATGCGTT TTATAGCACC GTCATCTCTA TCGGAACAAT GGCAAAATTA TATTGCTGGT
TATTTAGTGC AAAAAGGCAG TATAGCGGTT AATGGAATTA GTTTAACCAT TGCCGAGTGT
GATTCTGGAG GAAATTGGTT TAAAGTTTCT GTTATTCCTC ATACTTATAG TGAAACGAAT
CTTTGTTATC TTCAACCGGG AGATTGGGTT AATTTAGAAT GTGATATTTT AGGAAAATAT
GTCAATAAGT TGCTGACTCA TTCCTCAAAA AATATCCGTA ACCCAGAAGA AATCAGTCTA
AGTTTTTTGG CTGAACATGG ATATTTAAGC TAA
|
|---|
| Protein sequence | MFTGLIQGLG TIKSLSQDRF TLSVLPSATD SILSDLVIGD SVAVDGVCLT VEEILLDGFI
ATASPETLQR TTLGRRERAA EYINLETSLR VGSKLGGHFV TGHVDGLGCL EKAISTEKSW
EMRFIAPSSL SEQWQNYIAG YLVQKGSIAV NGISLTIAEC DSGGNWFKVS VIPHTYSETN
LCYLQPGDWV NLECDILGKY VNKLLTHSSK NIRNPEEISL SFLAEHGYLS
|
|---|
| |