Gene PC1_4285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4285 
SymbolpgaA 
ID8135288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4849034 
End bp4851496 
Gene Length2463 bp 
Protein Length820 aa 
Translation table11 
GC content51% 
IMG OID644867607 
Productouter membrane protein PgaA 
Protein accessionYP_003019835 
Protein GI253690645 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTCG TTAATTCTCA TTCAAGCAGA CTCAACCCAA TATTATTTAA CTTACTTAAA 
TCATTAGTTT ATTTTTCCTT CTCTGGCAGC GTGGTGGCGG CGGATTCTCA TTACGACACA
TTAATCATCA ATGCTCGTCA GGGGGATATA TCCACGGCGA CGTCATGGTT CGATGGGCAA
TCCAGAAACC GTGTATTGAC CGCAGCTGAA GTGACCGACT GGCTACAAAT TAACGGTTGG
GCGGGAAAGG ATGCTGAAGT GAGGCGAATT TGGGAAGCCT ATTCGCCAAC GATGTCACTG
CCCGATCCTG CGCTGAGAGC GGCGGCGAAA TCCTACCGTA ATCTCCGTCA GTGGCAGCCA
TCAGTGGCGT TATGGCGTCG GGTTTTGCAA CGTTCTCCAC GAGATGATGA TGCACGTAGT
GGTTTGATAC TCACCCTCGC CGATGCCGGA CAGACAAAAA CAGCGCTGGA ACTCGCTGCG
TCTCGCGTTA AGCGTGAGCC AACGGCAAAC CATTGGCGTG AATTAGCGTG GGTGCAACGA
ATTGCGGGAA AGCACACTGA TTCTCTCTTT TCTATCATTC AGGCTATGCG TTATGCACCA
CAGGATAAAG CCCTGCGCTA TGACTACAGC GATATTCTCT CCAGCAATAA TGTTAGCGCG
CCAGCGTTAA ACGCTCTGGA AAACGGCAAG CTCCATGGCG TCCAGACCGA CGAAAGGCAG
CGTCAGCGAG AACTGGAGGC GGCGGCGGAA TTGGTTCGTC TTGCGTTTAT TGCCTCGACA
ACGGAGAACG AACGTTTCGT TGTGGCGGAT CGCGCTTTAG CGCGTTATAG CGCCTTGATG
AATCAATGGC GAACGCATCC GTCAGCAAAA GCCAGCTATC GCCATGCGCG AATTGATCGG
CTAGGTGCAT TGCTGGTTCG CTATCGTATG GAAGAGGTTA TTTCGGAATA TCAATCCCTC
CTCAAAGAGG GAGATATTCC CAGTTATGCA CGACGCTGGG TCGCTTCTGC TTATCTCTAT
TTGCAGCAGC CAGAGAAAGC AGAGCAGATT CTCAGCGCGG TAATACAGGA AGATCCTTCG
CAACGCTTGC AGATAGCGCG GCAAGGCGAT TTTTTCTACA GCATTCTGGA GAGTGAAAAA
GTTGAACAGG CAACGCAGTT GTCCGTTCAG GCTGGAGAAA AAACACCTTA TAAGAAAAGT
GTTTATGGTT TATCAACCTT CATACCTAAC GACGATTGGG TTGACATCAA ATACCTGCGT
ATACAGTCAC TGATTTCTCA TAACGATTTT CCTGCGGCGC AACGACTGGC GGAACGTCTG
GCTTTTACCG GGCCAGGAAA CCAAGAGCTG AATATACGTT TGGCCGAAGT TTATCTCAGC
AGGGGATGGC CGCGTCGTGC CGAAACGTTA TTAAAGCGAG TTGAGTTGTT GGAGCCAAGA
TCATTCCGGT TGGAAACCCA CCAGGGACTT ACTGCATTGG AATTGCAGGA ATGGCGCCAA
CTTGAACAAC TGACTGACGA CACTGTAACC CGCTACCCGG ATGATTTCTC TGTGAAACGA
TTAGCGCGCC TGCGTCAGGT TCATCACATG GCGGAGTTGC GTATTGCTGG CGCTCAGGGG
CTCAAGTCTG ACAGTCCAAC GAAAGGAATG AACGACACCG AGATTGATGC TGTGCTCTAT
AGCCCGCCGT TTGCCGACCA TTGGCGTGTG TTCTCTGGGG GGGCTTTTAA TCAAAGCGAT
TTCAGTGATG GGCGGGCGAC TCATCGCGCT CTTCGCGGCG GCGTGGAATT TACCGATCGT
GACCATTGGG CTGAGACTGA GCTTTCACAC CGAAATTTTG GATTGGGTTC TGATATCGGC
GGGCGTCTCT CTTATCGCCA TGATGTTAAT GACTTTTGGC GTGTCGGCCT TAATGCCGAA
CGGCTCATGC GTAGCACACC GCTACAGGCA CTTAAAAATG GCGTAACGGC TAATGGTGCT
GGAGGGTATG TGCGCTGGCG GCAAAGTGAA CGGCGCTCAT GGCAAGCAGA CCTGTCGCAC
GGGTGGTTTT CTGATGGCAA CAGGCGTCAG GAATATGCAC TGAGTGGGCA AGAACGCGTC
TTTTCATCAC CGTCTTTAGT CATCGATTTC ACCCCGTCGC TCAGTGTGGG GGCGAACAGT
CAGCAAAACA CCCCTTATTA CAATCCACGG AAGTATGTGG CCGTCTTACC CGCCTTAGCC
ATCGATCACT TGCTTTATCG ACATTACCAG ACGGAGTGGC ATCAAGAGAT AACGGCGGGT
GTCGGGCGTT ACTGGCAGAA AGACGCTTCC GCTGGCGCTA TCACCCAACT CGGATACGGG
CAAAGAGTAC GGTGGAACGA CGTGCTGGAT ACGGGGGTGA GCGTTCAGTG GGATAAACGG
CCTTACGACG GCAAACGGGA ACAGAATGTG TCGCTGTCTT TTGATTTGAA TTATCGGTTT
TGA
 
Protein sequence
MSFVNSHSSR LNPILFNLLK SLVYFSFSGS VVAADSHYDT LIINARQGDI STATSWFDGQ 
SRNRVLTAAE VTDWLQINGW AGKDAEVRRI WEAYSPTMSL PDPALRAAAK SYRNLRQWQP
SVALWRRVLQ RSPRDDDARS GLILTLADAG QTKTALELAA SRVKREPTAN HWRELAWVQR
IAGKHTDSLF SIIQAMRYAP QDKALRYDYS DILSSNNVSA PALNALENGK LHGVQTDERQ
RQRELEAAAE LVRLAFIAST TENERFVVAD RALARYSALM NQWRTHPSAK ASYRHARIDR
LGALLVRYRM EEVISEYQSL LKEGDIPSYA RRWVASAYLY LQQPEKAEQI LSAVIQEDPS
QRLQIARQGD FFYSILESEK VEQATQLSVQ AGEKTPYKKS VYGLSTFIPN DDWVDIKYLR
IQSLISHNDF PAAQRLAERL AFTGPGNQEL NIRLAEVYLS RGWPRRAETL LKRVELLEPR
SFRLETHQGL TALELQEWRQ LEQLTDDTVT RYPDDFSVKR LARLRQVHHM AELRIAGAQG
LKSDSPTKGM NDTEIDAVLY SPPFADHWRV FSGGAFNQSD FSDGRATHRA LRGGVEFTDR
DHWAETELSH RNFGLGSDIG GRLSYRHDVN DFWRVGLNAE RLMRSTPLQA LKNGVTANGA
GGYVRWRQSE RRSWQADLSH GWFSDGNRRQ EYALSGQERV FSSPSLVIDF TPSLSVGANS
QQNTPYYNPR KYVAVLPALA IDHLLYRHYQ TEWHQEITAG VGRYWQKDAS AGAITQLGYG
QRVRWNDVLD TGVSVQWDKR PYDGKREQNV SLSFDLNYRF