| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4174 |
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| Symbol | |
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| ID | 8135172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4711985 |
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| End bp | 4713622 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644867491 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003019724 |
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| Protein GI | 253690534 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGACTT TTTTGCATCC TCATCAGAAA CTCACTATTT TTGCCTCGTT GCTCCTTCTG
GGCGGTGCAC TGAGCGCACA GGCAGCGAAC GACACACCAA AAATCGGCGG CACGCTGATT
TATCTGGAAC AGCAAGCACA TACCAATCTC TATACGCCCG CAGGCGGGTT TTACCCGAAC
GGCGGCATTC TCAACCAGAT TACCGACAAA CTGACGTACC AGAACCCGGA AACGCTGGAG
ATCGAGCCGT GGGTTGCGGA ATCCTGGACC GTCAACGCGG ATAACACCGA ATACACGTTC
AAGATTCGTC CCGGAATCAG CTTCTCTGAT GGCACTCCGC TGGATGCCAA CGCGGTAGCG
AAAAACTTTG ATACCTACGG TTTGGGGAAC ACAGCGCTCA ACCAACCGGT TTCAGAAGTC
ATCAATAACT ACCTGCGCAG TGAAGTCATC GACCCACTCA CGGTGAAGTT TTACTTTAAG
AAGCCCTCTC CAGGCTTTCT GCAAGGCACC TCAGCGATCG GTTCCGGTCT GGTATCTCTC
AGCACGCTTG AGCGCAATTT CAATCAGTTA GGCAATGCCA AAAACATTAT TGGTTCCGGT
CCGTTCGTCG TGAGCAGCGA GAAACTGGGA CGCGAACTGA AACTGACCGC CCGTAAGGAT
TACAACTGGG CACCGGTTAA ATCGAAGCAT CAGGGACGCG CCTATCTGGA CGGCATTACC
TATCTGGTGA CCCCGGAAGA CAGCGTGCGT ATTGGCGCGT TGGTATCCGG TCAGGCGGAT
TTCATTCGTC AGATTCAGGC CTACGATGAA AAGCGGGTGC AAAGTCAGAA CTTCAATCTT
TATGCCCCGC CTACGCGCGG CGTCAATAAC AGCGTGGTTT TCCGCCCGGA CAACCCGCTG
GTCGCCGATA TCCGCGTGCG TAAAGCGCTG CTACACGCCA CCAATACCAA AGAGATCATC
AATACGCTGT TCTCTGACAA TTACCCACAG GCTACCTCAC CGCTGGCCAA AACCGCCGCA
GGCTATGTCG ATCTCTCTAG CAAGCTCACC TTCGACCCCG CGCAAGCCAA CAAACTGTTA
GATGAAGCGG GGTGGAAAAC CGGTTCGCAG GGATTGCGGC AAAAAGACGG TAAAACGCTG
GAACTGACCG CTTATGAATC GCTGCCACAG CCGCAGAACA AAGAAACCTT ACAGTTGGTT
TCCCAGCAGT GGGCAAAAGT CGGCGTGAAG CTGAACGTGT TGGCGGGCGA TGCGGGCAGT
AAAACCGTCG ATAGCCTCGA TCCGCTGAAA ACCGGCGTTG CACCAGCGAT GGTAGGCCGC
GCCGACCCGG ATGTGCTGAA AAGCCAATAT TACCCGACGG TACGTAACGT CCTGCTGCAA
AAAGGTGGCT CCAGCGACAA AGTGAAGGAC TTTGTTGATC CGCATCTGAA TACGCTGCTG
GATGGCATCG CCGCTGAAAC CGACCGCAGC AAGCGGCTGG CGCTGGTCGG GGAGGTACAG
AACTACCTGA TCGATCAGGC CTACGTCATT CCCATTTTTG AAGAACCGCA GGTGTTTGCC
GGCGCGCCCA CGACAAAAGG CATCGCGTTT GAAGCCGTCG GTCGCCCGAG TTTCTACAAC
ACTTGGCTGG ATAAGTAA
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| Protein sequence | MATFLHPHQK LTIFASLLLL GGALSAQAAN DTPKIGGTLI YLEQQAHTNL YTPAGGFYPN
GGILNQITDK LTYQNPETLE IEPWVAESWT VNADNTEYTF KIRPGISFSD GTPLDANAVA
KNFDTYGLGN TALNQPVSEV INNYLRSEVI DPLTVKFYFK KPSPGFLQGT SAIGSGLVSL
STLERNFNQL GNAKNIIGSG PFVVSSEKLG RELKLTARKD YNWAPVKSKH QGRAYLDGIT
YLVTPEDSVR IGALVSGQAD FIRQIQAYDE KRVQSQNFNL YAPPTRGVNN SVVFRPDNPL
VADIRVRKAL LHATNTKEII NTLFSDNYPQ ATSPLAKTAA GYVDLSSKLT FDPAQANKLL
DEAGWKTGSQ GLRQKDGKTL ELTAYESLPQ PQNKETLQLV SQQWAKVGVK LNVLAGDAGS
KTVDSLDPLK TGVAPAMVGR ADPDVLKSQY YPTVRNVLLQ KGGSSDKVKD FVDPHLNTLL
DGIAAETDRS KRLALVGEVQ NYLIDQAYVI PIFEEPQVFA GAPTTKGIAF EAVGRPSFYN
TWLDK
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