Gene PC1_4055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4055 
Symbol 
ID8135053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp4584930 
End bp4585571 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content52% 
IMG OID644867373 
ProductSterol-binding domain protein 
Protein accessionYP_003019606 
Protein GI253690416 
COG category[S] Function unknown 
COG ID[COG3165] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGATAA CGTCTTTTCT GACTGCTACG CTGGAAACCG CGCTGAATCA GCTGCTTTTT 
CACGATACTG TTTCTGGCGA TCGTCGTTTT TCTTGCGATC GAAGCATGAA GTCTGCCCGC 
CAGCGCTTAC AGGGAAAAAC ACTTCAGATC GAGCTGGCTG AACTGGATGT GCCTCTGGTG 
CTGGTGTTTA ACGAACAGCG CCTGGACGTT GTCAGTCAGT GGGACGAATT GGCGGATTGC 
CGCCTGAAAA CACGCGTTCC GGTTCTGATG AAATTACGCG ATCGTCAACA GCTATCGTCG 
CTGATGCGCA GCGGCGAACT GGTGATTGAG GGTGATATTC AAGTCGTTCA ACAGTTCATT 
GTGCTGGTTG ATCTGGCGGA GTTCGATCCT GCGGAATGGC TGTCTCCCTA CCTGGGCGAT 
ATTGTTGCTC AAGGTCTTAG CCAGACGGCA CAGAAAACCC TGAGTTTCCT GAGACGGTCA 
TTACATCAGC AACAACATTT CCTGTCCGAG ACGTTAACGG AAGAGTGGCG ACTGGCACCG 
GGAAAACTGG AAAATGCCTG GTTCCATGAG GAAATTGTTG CGCTGGATAA ATCCGCCGAT 
GTGTTGTCCG AACGGCTGGC AAAGCTGGAG GCTTTACGAT GA
 
Protein sequence
MLITSFLTAT LETALNQLLF HDTVSGDRRF SCDRSMKSAR QRLQGKTLQI ELAELDVPLV 
LVFNEQRLDV VSQWDELADC RLKTRVPVLM KLRDRQQLSS LMRSGELVIE GDIQVVQQFI 
VLVDLAEFDP AEWLSPYLGD IVAQGLSQTA QKTLSFLRRS LHQQQHFLSE TLTEEWRLAP 
GKLENAWFHE EIVALDKSAD VLSERLAKLE ALR