Gene PC1_3974 details

Gene Information

• Locus tag: PC1_3974
• ID: 8134961
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: -
• Start bp: 4485325
• End bp: 4486029
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 644867281
• Product: hypothetical protein
• Protein accession: YP_003019525
• Protein GI: 253690335
• COG category: [S] Function unknown
• COG ID: [COG3159] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.469497
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAATG TCGAGGAACA GGCAGAGCGC GAGATCGCAC TCAGTGACGA GATGGTTTTG 
CAGTTCCTGC AACAGAATCC CGATTTTTTT ATCCGCAATG CGCGTCCCGT CGAGCAGATG 
CGCATTCCTC ACCCCGTCAG GGGAACCGTG TCGCTGGTAG AATGGCAACT GGCGCGTCAG 
CGTAACCACA TTACTCAGCT TGAGGAAGAG ATCACGCTGT TGATGGAACA GGCGGGGGCG 
AATGAAGCGT TGTTCAATCG CCTGCTTGGG TTACAGACTG AATTGGCATC GGCGGATAGC 
CTGACGGACA TGTTGGATCG GTTGCAGCGC TGGGCGCGTC AGCTTGGTCT GGCGGGCGCG 
ACGGTTCGTC TGTTCAGCGA TAAATGGCGC ATTGGTGCGC CGTCTGGTTT TACCCACCTC 
GGGCTAAACC GCACCACGTT TGAGCCGCTG CGCATTCAGC GTTTCGGGCA AAGTAACCAC 
TATCTTGGCA GCCTGAACGG GCCGGAACTA TTGCTCCTGC TGCCGCAGGC CAGGCAGGTT 
GGGTCGGTTG CGCTGTCGTT GATGGGCAAT AATCACGATT TGGGCGTGCT GATTTTCAGT 
AGCCGTGACA CCCATCATTA TCAGGATGGC ATGGGAACCG TACTGCTTCA GCAAATGGCC 
ATGATGCTGC CGGCGATGCT GGCGCGCTGG GTTGAGCGGG TATGA 

 

Protein sequence

MKNVEEQAER EIALSDEMVL QFLQQNPDFF IRNARPVEQM RIPHPVRGTV SLVEWQLARQ 
RNHITQLEEE ITLLMEQAGA NEALFNRLLG LQTELASADS LTDMLDRLQR WARQLGLAGA 
TVRLFSDKWR IGAPSGFTHL GLNRTTFEPL RIQRFGQSNH YLGSLNGPEL LLLLPQARQV 
GSVALSLMGN NHDLGVLIFS SRDTHHYQDG MGTVLLQQMA MMLPAMLARW VERV